Gene : Solyc03g083280.2 S. lycopersicum ITAG2.4
Defline:  (1 of 174) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Description:  Pentatricopeptide repeat-containing protein (AHRD V1 *-*- D7KJV7_ARALY); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat
Genomic Order:  1548 Name:  ? Solyc03g083280.2
Secondary Identifier:  ? PAC:36136141
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g083280.2 0.5kb upstream 0.5kb upstream 2709 true SL2.50ch03: 53120152-53122860 Solanum lycopersicum
Solyc03g083280.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 53122361-53122860 Solanum lycopersicum
Solyc03g083280.2 0.5kb downstream 0.5kb downstream 2709 true SL2.50ch03: 53119652-53122360 Solanum lycopersicum
Solyc03g083280.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 53119652-53120151 Solanum lycopersicum
Solyc03g083280.2 1.0kb upstream 1.0kb upstream 3209 true SL2.50ch03: 53120152-53123360 Solanum lycopersicum
Solyc03g083280.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 53122361-53123360 Solanum lycopersicum
Solyc03g083280.2 1.0kb downstream 1.0kb downstream 3209 true SL2.50ch03: 53119152-53122360 Solanum lycopersicum
Solyc03g083280.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 53119152-53120151 Solanum lycopersicum
Solyc03g083280.2 2.0kb upstream 2.0kb upstream 4209 true SL2.50ch03: 53120152-53124360 Solanum lycopersicum
Solyc03g083280.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 53122361-53124360 Solanum lycopersicum
Solyc03g083280.2 2.0kb downstream 2.0kb downstream 4209 true SL2.50ch03: 53118152-53122360 Solanum lycopersicum
Solyc03g083280.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 53118152-53120151 Solanum lycopersicum
Solyc03g083280.2 5.0kb upstream 5.0kb upstream 7209 true SL2.50ch03: 53120152-53127360 Solanum lycopersicum
Solyc03g083280.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 53122361-53127360 Solanum lycopersicum
Solyc03g083280.2 5.0kb downstream 5.0kb downstream 7209 true SL2.50ch03: 53115152-53122360 Solanum lycopersicum
Solyc03g083280.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 53115152-53120151 Solanum lycopersicum
Solyc03g083280.2 10.0kb upstream 10.0kb upstream 12209 true SL2.50ch03: 53120152-53132360 Solanum lycopersicum
Solyc03g083280.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 53122361-53132360 Solanum lycopersicum
Solyc03g083280.2 10.0kb downstream 10.0kb downstream 12209 true SL2.50ch03: 53110152-53122360 Solanum lycopersicum
Solyc03g083280.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 53110152-53120151 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471048 5263 Asterids View MSA
123738847 5271 Pentapetalae View MSA
122790244 5272 Eudicot View MSA
122041559 5273 Angiosperm View MSA
121309863 5274 Embryophyte View MSA
123347506 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain