Gene : Solyc09g009250.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR21654:SF5 - TRIHELIX TRANSCRIPTION FACTOR PTL Description:  Trihelix transcription factor (AHRD V1 **-* Q6Q6T0_ARATH); contains Interpro domain(s) IPR017877 MYB-like
Genomic Order:  320 Name:  ? Solyc09g009250.2
Secondary Identifier:  ? PAC:36133218
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc09g009250.2 0.5kb upstream 0.5kb upstream 3989 true SL2.50ch09: 2633959-2637947 Solanum lycopersicum
Solyc09g009250.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch09: 2633959-2634458 Solanum lycopersicum
Solyc09g009250.2 0.5kb downstream 0.5kb downstream 3989 true SL2.50ch09: 2634459-2638447 Solanum lycopersicum
Solyc09g009250.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch09: 2637948-2638447 Solanum lycopersicum
Solyc09g009250.2 1.0kb upstream 1.0kb upstream 4489 true SL2.50ch09: 2633459-2637947 Solanum lycopersicum
Solyc09g009250.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch09: 2633459-2634458 Solanum lycopersicum
Solyc09g009250.2 1.0kb downstream 1.0kb downstream 4489 true SL2.50ch09: 2634459-2638947 Solanum lycopersicum
Solyc09g009250.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch09: 2637948-2638947 Solanum lycopersicum
Solyc09g009250.2 2.0kb upstream 2.0kb upstream 5489 true SL2.50ch09: 2632459-2637947 Solanum lycopersicum
Solyc09g009250.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch09: 2632459-2634458 Solanum lycopersicum
Solyc09g009250.2 2.0kb downstream 2.0kb downstream 5489 true SL2.50ch09: 2634459-2639947 Solanum lycopersicum
Solyc09g009250.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch09: 2637948-2639947 Solanum lycopersicum
Solyc09g009250.2 5.0kb upstream 5.0kb upstream 8489 true SL2.50ch09: 2629459-2637947 Solanum lycopersicum
Solyc09g009250.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch09: 2629459-2634458 Solanum lycopersicum
Solyc09g009250.2 5.0kb downstream 5.0kb downstream 8489 true SL2.50ch09: 2634459-2642947 Solanum lycopersicum
Solyc09g009250.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch09: 2637948-2642947 Solanum lycopersicum
Solyc09g009250.2 10.0kb upstream 10.0kb upstream 13489 true SL2.50ch09: 2624459-2637947 Solanum lycopersicum
Solyc09g009250.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch09: 2624459-2634458 Solanum lycopersicum
Solyc09g009250.2 10.0kb downstream 10.0kb downstream 13489 true SL2.50ch09: 2634459-2647947 Solanum lycopersicum
Solyc09g009250.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch09: 2637948-2647947 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471364 5263 Asterids View MSA
123751862 5271 Pentapetalae View MSA
122786216 5272 Eudicot View MSA
122049868 5273 Angiosperm View MSA
121349901 5274 Embryophyte View MSA
123381491 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain