Gene : Solyc09g009080.2 S. lycopersicum ITAG2.4
Defline:  (1 of 4) 3.2.2.27 - Uracil-DNA glycosylase / Uracil-DNA N-glycosylase Description:  Repressor of silencing 1 (AHRD V1 **-- A4PF88_TOBAC); contains Interpro domain(s) IPR003265 HhH-GPD domain
Genomic Order:  303 Name:  ? Solyc09g009080.2
Secondary Identifier:  ? PAC:36131948
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc09g009080.2 0.5kb upstream 0.5kb upstream 9875 true SL2.50ch09: 2409322-2419196 Solanum lycopersicum
Solyc09g009080.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch09: 2409322-2409821 Solanum lycopersicum
Solyc09g009080.2 0.5kb downstream 0.5kb downstream 9875 true SL2.50ch09: 2409822-2419696 Solanum lycopersicum
Solyc09g009080.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch09: 2419197-2419696 Solanum lycopersicum
Solyc09g009080.2 1.0kb upstream 1.0kb upstream 10375 true SL2.50ch09: 2408822-2419196 Solanum lycopersicum
Solyc09g009080.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch09: 2408822-2409821 Solanum lycopersicum
Solyc09g009080.2 1.0kb downstream 1.0kb downstream 10375 true SL2.50ch09: 2409822-2420196 Solanum lycopersicum
Solyc09g009080.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch09: 2419197-2420196 Solanum lycopersicum
Solyc09g009080.2 2.0kb upstream 2.0kb upstream 11375 true SL2.50ch09: 2407822-2419196 Solanum lycopersicum
Solyc09g009080.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch09: 2407822-2409821 Solanum lycopersicum
Solyc09g009080.2 2.0kb downstream 2.0kb downstream 11375 true SL2.50ch09: 2409822-2421196 Solanum lycopersicum
Solyc09g009080.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch09: 2419197-2421196 Solanum lycopersicum
Solyc09g009080.2 5.0kb upstream 5.0kb upstream 14375 true SL2.50ch09: 2404822-2419196 Solanum lycopersicum
Solyc09g009080.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch09: 2404822-2409821 Solanum lycopersicum
Solyc09g009080.2 5.0kb downstream 5.0kb downstream 14375 true SL2.50ch09: 2409822-2424196 Solanum lycopersicum
Solyc09g009080.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch09: 2419197-2424196 Solanum lycopersicum
Solyc09g009080.2 10.0kb upstream 10.0kb upstream 19375 true SL2.50ch09: 2399822-2419196 Solanum lycopersicum
Solyc09g009080.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch09: 2399822-2409821 Solanum lycopersicum
Solyc09g009080.2 10.0kb downstream 10.0kb downstream 19375 true SL2.50ch09: 2409822-2429196 Solanum lycopersicum
Solyc09g009080.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch09: 2419197-2429196 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480512 5263 Asterids View MSA
123746757 5271 Pentapetalae View MSA
122794204 5272 Eudicot View MSA
122044419 5273 Angiosperm View MSA
121348532 5274 Embryophyte View MSA
123428690 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain