Gene : Solyc09g008130.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR11406//PTHR11406:SF13 - PHOSPHOGLYCERATE KINASE // SUBFAMILY NOT NAMED Description:  Phosphoglycerate kinase (AHRD V1 ***- B9IFP7_POPTR); contains Interpro domain(s) IPR001576 Phosphoglycerate kinase
Genomic Order:  214 Name:  ? Solyc09g008130.2
Secondary Identifier:  ? PAC:36131285
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum ANAEROFRUCAT-PWY Solanum lycopersicum pathologic  
Slycopersicum ANAGLYCOLYSIS-PWY Solanum lycopersicum pathologic  
Slycopersicum CALVIN-PWY Solanum lycopersicum pathologic  
Slycopersicum GLUCONEO-PWY Solanum lycopersicum pathologic  
Slycopersicum PHOTOALL-PWY Solanum lycopersicum pathologic  
Slycopersicum PWY-1042 Solanum lycopersicum pathologic  
Slycopersicum PWY-5464 Solanum lycopersicum pathologic  
Slycopersicum SUCSYN-PWY Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc09g008130.2 0.5kb upstream 0.5kb upstream 7050 true SL2.50ch09: 1600648-1607697 Solanum lycopersicum
Solyc09g008130.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch09: 1607198-1607697 Solanum lycopersicum
Solyc09g008130.2 0.5kb downstream 0.5kb downstream 7050 true SL2.50ch09: 1600148-1607197 Solanum lycopersicum
Solyc09g008130.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch09: 1600148-1600647 Solanum lycopersicum
Solyc09g008130.2 1.0kb upstream 1.0kb upstream 7550 true SL2.50ch09: 1600648-1608197 Solanum lycopersicum
Solyc09g008130.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch09: 1607198-1608197 Solanum lycopersicum
Solyc09g008130.2 1.0kb downstream 1.0kb downstream 7550 true SL2.50ch09: 1599648-1607197 Solanum lycopersicum
Solyc09g008130.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch09: 1599648-1600647 Solanum lycopersicum
Solyc09g008130.2 2.0kb upstream 2.0kb upstream 8550 true SL2.50ch09: 1600648-1609197 Solanum lycopersicum
Solyc09g008130.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch09: 1607198-1609197 Solanum lycopersicum
Solyc09g008130.2 2.0kb downstream 2.0kb downstream 8550 true SL2.50ch09: 1598648-1607197 Solanum lycopersicum
Solyc09g008130.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch09: 1598648-1600647 Solanum lycopersicum
Solyc09g008130.2 5.0kb upstream 5.0kb upstream 11550 true SL2.50ch09: 1600648-1612197 Solanum lycopersicum
Solyc09g008130.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch09: 1607198-1612197 Solanum lycopersicum
Solyc09g008130.2 5.0kb downstream 5.0kb downstream 11550 true SL2.50ch09: 1595648-1607197 Solanum lycopersicum
Solyc09g008130.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch09: 1595648-1600647 Solanum lycopersicum
Solyc09g008130.2 10.0kb upstream 10.0kb upstream 16550 true SL2.50ch09: 1600648-1617197 Solanum lycopersicum
Solyc09g008130.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch09: 1607198-1617197 Solanum lycopersicum
Solyc09g008130.2 10.0kb downstream 10.0kb downstream 16550 true SL2.50ch09: 1590648-1607197 Solanum lycopersicum
Solyc09g008130.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch09: 1590648-1600647 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468994 5263 Asterids View MSA
123742375 5271 Pentapetalae View MSA
122794772 5272 Eudicot View MSA
122048515 5273 Angiosperm View MSA
121310998 5274 Embryophyte View MSA
123425871 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain