Gene : Solyc09g008020.2 S. lycopersicum ITAG2.4
Defline:  (1 of 3) PTHR12419//PTHR12419:SF19 - OTU DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Description:  Cysteine-type peptidase (AHRD V1 **** B6T6Y3_MAIZE); contains Interpro domain(s) IPR003323 Ovarian tumour, otubain
Genomic Order:  203 Name:  ? Solyc09g008020.2
Secondary Identifier:  ? PAC:36133488
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc09g008020.2 0.5kb upstream 0.5kb upstream 4949 true SL2.50ch09: 1499365-1504313 Solanum lycopersicum
Solyc09g008020.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch09: 1499365-1499864 Solanum lycopersicum
Solyc09g008020.2 0.5kb downstream 0.5kb downstream 4949 true SL2.50ch09: 1499865-1504813 Solanum lycopersicum
Solyc09g008020.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch09: 1504314-1504813 Solanum lycopersicum
Solyc09g008020.2 1.0kb upstream 1.0kb upstream 5449 true SL2.50ch09: 1498865-1504313 Solanum lycopersicum
Solyc09g008020.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch09: 1498865-1499864 Solanum lycopersicum
Solyc09g008020.2 1.0kb downstream 1.0kb downstream 5449 true SL2.50ch09: 1499865-1505313 Solanum lycopersicum
Solyc09g008020.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch09: 1504314-1505313 Solanum lycopersicum
Solyc09g008020.2 2.0kb upstream 2.0kb upstream 6449 true SL2.50ch09: 1497865-1504313 Solanum lycopersicum
Solyc09g008020.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch09: 1497865-1499864 Solanum lycopersicum
Solyc09g008020.2 2.0kb downstream 2.0kb downstream 6449 true SL2.50ch09: 1499865-1506313 Solanum lycopersicum
Solyc09g008020.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch09: 1504314-1506313 Solanum lycopersicum
Solyc09g008020.2 5.0kb upstream 5.0kb upstream 9449 true SL2.50ch09: 1494865-1504313 Solanum lycopersicum
Solyc09g008020.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch09: 1494865-1499864 Solanum lycopersicum
Solyc09g008020.2 5.0kb downstream 5.0kb downstream 9449 true SL2.50ch09: 1499865-1509313 Solanum lycopersicum
Solyc09g008020.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch09: 1504314-1509313 Solanum lycopersicum
Solyc09g008020.2 10.0kb upstream 10.0kb upstream 14449 true SL2.50ch09: 1489865-1504313 Solanum lycopersicum
Solyc09g008020.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch09: 1489865-1499864 Solanum lycopersicum
Solyc09g008020.2 10.0kb downstream 10.0kb downstream 14449 true SL2.50ch09: 1499865-1514313 Solanum lycopersicum
Solyc09g008020.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch09: 1504314-1514313 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469988 5263 Asterids View MSA
123743617 5271 Pentapetalae View MSA
122787682 5272 Eudicot View MSA
122042328 5273 Angiosperm View MSA
121348332 5274 Embryophyte View MSA
123428461 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain