Gene : Solyc09g008420.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR18952:SF100 - ALPHA CARBONIC ANHYDRASE 5 Description:  Carbonic anhydrase (Carbonate dehydratase) (AHRD V1 **** C1DTU5_SULAA); contains Interpro domain(s) IPR018340 Carbonic anhydrase, CAH1-like
Genomic Order:  243 Name:  ? Solyc09g008420.2
Secondary Identifier:  ? PAC:36131497
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum CYANCAT-PWY Solanum lycopersicum pathologic  
Slycopersicum PWY-241 Solanum lycopersicum pathologic  
Slycopersicum PWY-7115 Solanum lycopersicum pathologic  
Slycopersicum PWY-7117 Solanum lycopersicum pathologic  
Slycopersicum PWYQT-4429 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc09g008420.2 0.5kb upstream 0.5kb upstream 5123 true SL2.50ch09: 1871403-1876525 Solanum lycopersicum
Solyc09g008420.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch09: 1871403-1871902 Solanum lycopersicum
Solyc09g008420.2 0.5kb downstream 0.5kb downstream 5123 true SL2.50ch09: 1871903-1877025 Solanum lycopersicum
Solyc09g008420.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch09: 1876526-1877025 Solanum lycopersicum
Solyc09g008420.2 1.0kb upstream 1.0kb upstream 5623 true SL2.50ch09: 1870903-1876525 Solanum lycopersicum
Solyc09g008420.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch09: 1870903-1871902 Solanum lycopersicum
Solyc09g008420.2 1.0kb downstream 1.0kb downstream 5623 true SL2.50ch09: 1871903-1877525 Solanum lycopersicum
Solyc09g008420.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch09: 1876526-1877525 Solanum lycopersicum
Solyc09g008420.2 2.0kb upstream 2.0kb upstream 6623 true SL2.50ch09: 1869903-1876525 Solanum lycopersicum
Solyc09g008420.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch09: 1869903-1871902 Solanum lycopersicum
Solyc09g008420.2 2.0kb downstream 2.0kb downstream 6623 true SL2.50ch09: 1871903-1878525 Solanum lycopersicum
Solyc09g008420.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch09: 1876526-1878525 Solanum lycopersicum
Solyc09g008420.2 5.0kb upstream 5.0kb upstream 9623 true SL2.50ch09: 1866903-1876525 Solanum lycopersicum
Solyc09g008420.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch09: 1866903-1871902 Solanum lycopersicum
Solyc09g008420.2 5.0kb downstream 5.0kb downstream 9623 true SL2.50ch09: 1871903-1881525 Solanum lycopersicum
Solyc09g008420.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch09: 1876526-1881525 Solanum lycopersicum
Solyc09g008420.2 10.0kb upstream 10.0kb upstream 14623 true SL2.50ch09: 1861903-1876525 Solanum lycopersicum
Solyc09g008420.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch09: 1861903-1871902 Solanum lycopersicum
Solyc09g008420.2 10.0kb downstream 10.0kb downstream 14623 true SL2.50ch09: 1871903-1886525 Solanum lycopersicum
Solyc09g008420.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch09: 1876526-1886525 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121712782 5273 Angiosperm View MSA
121388965 5263 Asterids View MSA
123669406 5271 Pentapetalae View MSA
122703293 5272 Eudicot View MSA
120984495 5274 Embryophyte View MSA
123428273 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain