Gene : Solyc09g010350.2 S. lycopersicum ITAG2.4
Defline:  (1 of 34) PF16135 - TPL-binding domain in jasmonate signalling (Jas) Description:  Genomic DNA chromosome 5 P1 clone MSH12 (AHRD V1 **-- Q9FNA6_ARATH)
Genomic Order:  429 Name:  ? Solyc09g010350.2
Secondary Identifier:  ? PAC:36132338
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc09g010350.2 0.5kb upstream 0.5kb upstream 2662 true SL2.50ch09: 3735469-3738130 Solanum lycopersicum
Solyc09g010350.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch09: 3735469-3735968 Solanum lycopersicum
Solyc09g010350.2 0.5kb downstream 0.5kb downstream 2662 true SL2.50ch09: 3735969-3738630 Solanum lycopersicum
Solyc09g010350.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch09: 3738131-3738630 Solanum lycopersicum
Solyc09g010350.2 1.0kb upstream 1.0kb upstream 3162 true SL2.50ch09: 3734969-3738130 Solanum lycopersicum
Solyc09g010350.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch09: 3734969-3735968 Solanum lycopersicum
Solyc09g010350.2 1.0kb downstream 1.0kb downstream 3162 true SL2.50ch09: 3735969-3739130 Solanum lycopersicum
Solyc09g010350.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch09: 3738131-3739130 Solanum lycopersicum
Solyc09g010350.2 2.0kb upstream 2.0kb upstream 4162 true SL2.50ch09: 3733969-3738130 Solanum lycopersicum
Solyc09g010350.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch09: 3733969-3735968 Solanum lycopersicum
Solyc09g010350.2 2.0kb downstream 2.0kb downstream 4162 true SL2.50ch09: 3735969-3740130 Solanum lycopersicum
Solyc09g010350.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch09: 3738131-3740130 Solanum lycopersicum
Solyc09g010350.2 5.0kb upstream 5.0kb upstream 7162 true SL2.50ch09: 3730969-3738130 Solanum lycopersicum
Solyc09g010350.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch09: 3730969-3735968 Solanum lycopersicum
Solyc09g010350.2 5.0kb downstream 5.0kb downstream 7162 true SL2.50ch09: 3735969-3743130 Solanum lycopersicum
Solyc09g010350.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch09: 3738131-3743130 Solanum lycopersicum
Solyc09g010350.2 10.0kb upstream 10.0kb upstream 12162 true SL2.50ch09: 3725969-3738130 Solanum lycopersicum
Solyc09g010350.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch09: 3725969-3735968 Solanum lycopersicum
Solyc09g010350.2 10.0kb downstream 10.0kb downstream 12162 true SL2.50ch09: 3735969-3748130 Solanum lycopersicum
Solyc09g010350.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch09: 3738131-3748130 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478581 5263 Asterids View MSA
123747463 5271 Pentapetalae View MSA
122794643 5272 Eudicot View MSA
122051104 5273 Angiosperm View MSA
121312296 5274 Embryophyte View MSA
123349483 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain