Gene : Solyc09g010620.1 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR19923 - WD40 REPEAT PROTEINPRL1/PRL2-RELATED Description:  Pre-mRNA-splicing factor (AHRD V1 **-- C0NJ63_AJECG); contains Interpro domain(s) IPR020472 G-protein beta WD-40 repeat, region
Genomic Order:  456 Name:  ? Solyc09g010620.1
Secondary Identifier:  ? PAC:36132532
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc09g010620.1 0.5kb upstream 0.5kb upstream 992 true SL2.50ch09: 3960469-3961460 Solanum lycopersicum
Solyc09g010620.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch09: 3960469-3960968 Solanum lycopersicum
Solyc09g010620.1 0.5kb downstream 0.5kb downstream 992 true SL2.50ch09: 3960969-3961960 Solanum lycopersicum
Solyc09g010620.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch09: 3961461-3961960 Solanum lycopersicum
Solyc09g010620.1 1.0kb upstream 1.0kb upstream 1492 true SL2.50ch09: 3959969-3961460 Solanum lycopersicum
Solyc09g010620.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch09: 3959969-3960968 Solanum lycopersicum
Solyc09g010620.1 1.0kb downstream 1.0kb downstream 1492 true SL2.50ch09: 3960969-3962460 Solanum lycopersicum
Solyc09g010620.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch09: 3961461-3962460 Solanum lycopersicum
Solyc09g010620.1 2.0kb upstream 2.0kb upstream 2492 true SL2.50ch09: 3958969-3961460 Solanum lycopersicum
Solyc09g010620.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch09: 3958969-3960968 Solanum lycopersicum
Solyc09g010620.1 2.0kb downstream 2.0kb downstream 2492 true SL2.50ch09: 3960969-3963460 Solanum lycopersicum
Solyc09g010620.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch09: 3961461-3963460 Solanum lycopersicum
Solyc09g010620.1 5.0kb upstream 5.0kb upstream 5492 true SL2.50ch09: 3955969-3961460 Solanum lycopersicum
Solyc09g010620.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch09: 3955969-3960968 Solanum lycopersicum
Solyc09g010620.1 5.0kb downstream 5.0kb downstream 5492 true SL2.50ch09: 3960969-3966460 Solanum lycopersicum
Solyc09g010620.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch09: 3961461-3966460 Solanum lycopersicum
Solyc09g010620.1 10.0kb upstream 10.0kb upstream 10492 true SL2.50ch09: 3950969-3961460 Solanum lycopersicum
Solyc09g010620.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch09: 3950969-3960968 Solanum lycopersicum
Solyc09g010620.1 10.0kb downstream 10.0kb downstream 10492 true SL2.50ch09: 3960969-3971460 Solanum lycopersicum
Solyc09g010620.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch09: 3961461-3971460 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480438 5263 Asterids View MSA
123753307 5271 Pentapetalae View MSA
122797815 5272 Eudicot View MSA
122050667 5273 Angiosperm View MSA
121343955 5274 Embryophyte View MSA
123424287 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain