Gene : Solyc09g009960.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) 2.7.8.7 - Holo-[acyl-carrier-protein] synthase / PPTase Description:  4&apos-phosphopantetheinyl transferase family protein (AHRD V1 ***- D7LAN4_ARALY); contains Interpro domain(s) IPR008278 4'-phosphopantetheinyl transferase
Genomic Order:  391 Name:  ? Solyc09g009960.2
Secondary Identifier:  ? PAC:36132721
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-6012-1 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc09g009960.2 0.5kb upstream 0.5kb upstream 4590 true SL2.50ch09: 3412363-3416952 Solanum lycopersicum
Solyc09g009960.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch09: 3416453-3416952 Solanum lycopersicum
Solyc09g009960.2 0.5kb downstream 0.5kb downstream 4590 true SL2.50ch09: 3411863-3416452 Solanum lycopersicum
Solyc09g009960.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch09: 3411863-3412362 Solanum lycopersicum
Solyc09g009960.2 1.0kb upstream 1.0kb upstream 5090 true SL2.50ch09: 3412363-3417452 Solanum lycopersicum
Solyc09g009960.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch09: 3416453-3417452 Solanum lycopersicum
Solyc09g009960.2 1.0kb downstream 1.0kb downstream 5090 true SL2.50ch09: 3411363-3416452 Solanum lycopersicum
Solyc09g009960.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch09: 3411363-3412362 Solanum lycopersicum
Solyc09g009960.2 2.0kb upstream 2.0kb upstream 6090 true SL2.50ch09: 3412363-3418452 Solanum lycopersicum
Solyc09g009960.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch09: 3416453-3418452 Solanum lycopersicum
Solyc09g009960.2 2.0kb downstream 2.0kb downstream 6090 true SL2.50ch09: 3410363-3416452 Solanum lycopersicum
Solyc09g009960.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch09: 3410363-3412362 Solanum lycopersicum
Solyc09g009960.2 5.0kb upstream 5.0kb upstream 9090 true SL2.50ch09: 3412363-3421452 Solanum lycopersicum
Solyc09g009960.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch09: 3416453-3421452 Solanum lycopersicum
Solyc09g009960.2 5.0kb downstream 5.0kb downstream 9090 true SL2.50ch09: 3407363-3416452 Solanum lycopersicum
Solyc09g009960.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch09: 3407363-3412362 Solanum lycopersicum
Solyc09g009960.2 10.0kb upstream 10.0kb upstream 14090 true SL2.50ch09: 3412363-3426452 Solanum lycopersicum
Solyc09g009960.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch09: 3416453-3426452 Solanum lycopersicum
Solyc09g009960.2 10.0kb downstream 10.0kb downstream 14090 true SL2.50ch09: 3402363-3416452 Solanum lycopersicum
Solyc09g009960.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch09: 3402363-3412362 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466541 5263 Asterids View MSA
123736560 5271 Pentapetalae View MSA
122793006 5272 Eudicot View MSA
122041832 5273 Angiosperm View MSA
123429078 5275 Viridiplantae View MSA
121344089 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain