Gene : Solyc09g009910.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) 3.6.3.39 - Lipopolysaccharide-transporting ATPase Description:  Lipid A ABC transporter permease/ATP-binding protein (AHRD V1 **** D3L345_9BACT); contains Interpro domain(s) IPR003439 ABC transporter-like
Genomic Order:  386 Name:  ? Solyc09g009910.2
Secondary Identifier:  ? PAC:36131342
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc09g009910.2 0.5kb upstream 0.5kb upstream 9581 true SL2.50ch09: 3386287-3395867 Solanum lycopersicum
Solyc09g009910.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch09: 3395368-3395867 Solanum lycopersicum
Solyc09g009910.2 0.5kb downstream 0.5kb downstream 9581 true SL2.50ch09: 3385787-3395367 Solanum lycopersicum
Solyc09g009910.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch09: 3385787-3386286 Solanum lycopersicum
Solyc09g009910.2 1.0kb upstream 1.0kb upstream 10081 true SL2.50ch09: 3386287-3396367 Solanum lycopersicum
Solyc09g009910.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch09: 3395368-3396367 Solanum lycopersicum
Solyc09g009910.2 1.0kb downstream 1.0kb downstream 10081 true SL2.50ch09: 3385287-3395367 Solanum lycopersicum
Solyc09g009910.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch09: 3385287-3386286 Solanum lycopersicum
Solyc09g009910.2 2.0kb upstream 2.0kb upstream 11081 true SL2.50ch09: 3386287-3397367 Solanum lycopersicum
Solyc09g009910.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch09: 3395368-3397367 Solanum lycopersicum
Solyc09g009910.2 2.0kb downstream 2.0kb downstream 11081 true SL2.50ch09: 3384287-3395367 Solanum lycopersicum
Solyc09g009910.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch09: 3384287-3386286 Solanum lycopersicum
Solyc09g009910.2 5.0kb upstream 5.0kb upstream 14081 true SL2.50ch09: 3386287-3400367 Solanum lycopersicum
Solyc09g009910.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch09: 3395368-3400367 Solanum lycopersicum
Solyc09g009910.2 5.0kb downstream 5.0kb downstream 14081 true SL2.50ch09: 3381287-3395367 Solanum lycopersicum
Solyc09g009910.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch09: 3381287-3386286 Solanum lycopersicum
Solyc09g009910.2 10.0kb upstream 10.0kb upstream 19081 true SL2.50ch09: 3386287-3405367 Solanum lycopersicum
Solyc09g009910.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch09: 3395368-3405367 Solanum lycopersicum
Solyc09g009910.2 10.0kb downstream 10.0kb downstream 19081 true SL2.50ch09: 3376287-3395367 Solanum lycopersicum
Solyc09g009910.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch09: 3376287-3386286 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472189 5263 Asterids View MSA
123739432 5271 Pentapetalae View MSA
122788851 5272 Eudicot View MSA
122048026 5273 Angiosperm View MSA
123429075 5275 Viridiplantae View MSA
121344960 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain