Gene : Solyc03g123830.2 S. lycopersicum ITAG2.4
Defline:  (1 of 3) 1.1.1.95 - Phosphoglycerate dehydrogenase / Phosphoglyceric acid dehydrogenase Description:  Phosphoglycerate dehydrogenase (AHRD V1 **** D2D316_GOSHI); contains Interpro domain(s) IPR015508 D-3-phosphogylcerate Dehydrogenase
Genomic Order:  3327 Name:  ? Solyc03g123830.2
Secondary Identifier:  ? PAC:36136797
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum SER-GLYSYN-PWY Solanum lycopersicum pathologic  
Slycopersicum SERSYN-PWY Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g123830.2 0.5kb upstream 0.5kb upstream 3589 true SL2.50ch03: 70540256-70543844 Solanum lycopersicum
Solyc03g123830.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 70540256-70540755 Solanum lycopersicum
Solyc03g123830.2 0.5kb downstream 0.5kb downstream 3589 true SL2.50ch03: 70540756-70544344 Solanum lycopersicum
Solyc03g123830.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 70543845-70544344 Solanum lycopersicum
Solyc03g123830.2 1.0kb upstream 1.0kb upstream 4089 true SL2.50ch03: 70539756-70543844 Solanum lycopersicum
Solyc03g123830.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 70539756-70540755 Solanum lycopersicum
Solyc03g123830.2 1.0kb downstream 1.0kb downstream 4089 true SL2.50ch03: 70540756-70544844 Solanum lycopersicum
Solyc03g123830.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 70543845-70544844 Solanum lycopersicum
Solyc03g123830.2 2.0kb upstream 2.0kb upstream 5089 true SL2.50ch03: 70538756-70543844 Solanum lycopersicum
Solyc03g123830.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 70538756-70540755 Solanum lycopersicum
Solyc03g123830.2 2.0kb downstream 2.0kb downstream 5089 true SL2.50ch03: 70540756-70545844 Solanum lycopersicum
Solyc03g123830.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 70543845-70545844 Solanum lycopersicum
Solyc03g123830.2 5.0kb upstream 5.0kb upstream 8089 true SL2.50ch03: 70535756-70543844 Solanum lycopersicum
Solyc03g123830.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 70535756-70540755 Solanum lycopersicum
Solyc03g123830.2 5.0kb downstream 5.0kb downstream 8089 true SL2.50ch03: 70540756-70548844 Solanum lycopersicum
Solyc03g123830.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 70543845-70548844 Solanum lycopersicum
Solyc03g123830.2 10.0kb upstream 10.0kb upstream 13089 true SL2.50ch03: 70530756-70543844 Solanum lycopersicum
Solyc03g123830.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 70530756-70540755 Solanum lycopersicum
Solyc03g123830.2 10.0kb downstream 10.0kb downstream 13089 true SL2.50ch03: 70540756-70553844 Solanum lycopersicum
Solyc03g123830.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 70543845-70553844 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468047 5263 Asterids View MSA
123744106 5271 Pentapetalae View MSA
122795023 5272 Eudicot View MSA
122044765 5273 Angiosperm View MSA
121347094 5274 Embryophyte View MSA
123427510 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain