Gene : Solyc09g005030.1 S. lycopersicum ITAG2.4
Defline:  (1 of 258) PF00249 - Myb-like DNA-binding domain (Myb_DNA-binding) Description:  MYB transcription factor-like (AHRD V1 *--- Q5Z6X2_ORYSJ); contains Interpro domain(s) IPR006447 Myb-like DNA-binding region, SHAQKYF class
Genomic Order:  4 Name:  ? Solyc09g005030.1
Secondary Identifier:  ? PAC:36133186
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc09g005030.1 0.5kb upstream 0.5kb upstream 1256 true SL2.50ch09: 21205-22460 Solanum lycopersicum
Solyc09g005030.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch09: 21205-21704 Solanum lycopersicum
Solyc09g005030.1 0.5kb downstream 0.5kb downstream 1256 true SL2.50ch09: 21705-22960 Solanum lycopersicum
Solyc09g005030.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch09: 22461-22960 Solanum lycopersicum
Solyc09g005030.1 1.0kb upstream 1.0kb upstream 1756 true SL2.50ch09: 20705-22460 Solanum lycopersicum
Solyc09g005030.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch09: 20705-21704 Solanum lycopersicum
Solyc09g005030.1 1.0kb downstream 1.0kb downstream 1756 true SL2.50ch09: 21705-23460 Solanum lycopersicum
Solyc09g005030.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch09: 22461-23460 Solanum lycopersicum
Solyc09g005030.1 2.0kb upstream 2.0kb upstream 2756 true SL2.50ch09: 19705-22460 Solanum lycopersicum
Solyc09g005030.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch09: 19705-21704 Solanum lycopersicum
Solyc09g005030.1 2.0kb downstream 2.0kb downstream 2756 true SL2.50ch09: 21705-24460 Solanum lycopersicum
Solyc09g005030.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch09: 22461-24460 Solanum lycopersicum
Solyc09g005030.1 5.0kb upstream 5.0kb upstream 5756 true SL2.50ch09: 16705-22460 Solanum lycopersicum
Solyc09g005030.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch09: 16705-21704 Solanum lycopersicum
Solyc09g005030.1 5.0kb downstream 5.0kb downstream 5756 true SL2.50ch09: 21705-27460 Solanum lycopersicum
Solyc09g005030.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch09: 22461-27460 Solanum lycopersicum
Solyc09g005030.1 10.0kb upstream 10.0kb upstream 10756 true SL2.50ch09: 11705-22460 Solanum lycopersicum
Solyc09g005030.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch09: 11705-21704 Solanum lycopersicum
Solyc09g005030.1 10.0kb downstream 10.0kb downstream 10756 true SL2.50ch09: 21705-32460 Solanum lycopersicum
Solyc09g005030.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch09: 22461-32460 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471930 5263 Asterids View MSA
123753630 5271 Pentapetalae View MSA
122795386 5272 Eudicot View MSA
122048998 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121350891 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain