Gene : Solyc03g121950.2 S. lycopersicum ITAG2.4
Defline:  (1 of 3) PTHR12854 - ATAXIN 2-RELATED Description:  Ataxin-2 (AHRD V1 *--- D3BPE8_POLPA); contains Interpro domain(s) IPR009604 LsmAD domain
Genomic Order:  3238 Name:  ? Solyc03g121950.2
Secondary Identifier:  ? PAC:36136513
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g121950.2 0.5kb upstream 0.5kb upstream 9679 true SL2.50ch03: 69944115-69953793 Solanum lycopersicum
Solyc03g121950.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 69953294-69953793 Solanum lycopersicum
Solyc03g121950.2 0.5kb downstream 0.5kb downstream 9679 true SL2.50ch03: 69943615-69953293 Solanum lycopersicum
Solyc03g121950.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 69943615-69944114 Solanum lycopersicum
Solyc03g121950.2 1.0kb upstream 1.0kb upstream 10179 true SL2.50ch03: 69944115-69954293 Solanum lycopersicum
Solyc03g121950.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 69953294-69954293 Solanum lycopersicum
Solyc03g121950.2 1.0kb downstream 1.0kb downstream 10179 true SL2.50ch03: 69943115-69953293 Solanum lycopersicum
Solyc03g121950.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 69943115-69944114 Solanum lycopersicum
Solyc03g121950.2 2.0kb upstream 2.0kb upstream 11179 true SL2.50ch03: 69944115-69955293 Solanum lycopersicum
Solyc03g121950.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 69953294-69955293 Solanum lycopersicum
Solyc03g121950.2 2.0kb downstream 2.0kb downstream 11179 true SL2.50ch03: 69942115-69953293 Solanum lycopersicum
Solyc03g121950.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 69942115-69944114 Solanum lycopersicum
Solyc03g121950.2 5.0kb upstream 5.0kb upstream 14179 true SL2.50ch03: 69944115-69958293 Solanum lycopersicum
Solyc03g121950.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 69953294-69958293 Solanum lycopersicum
Solyc03g121950.2 5.0kb downstream 5.0kb downstream 14179 true SL2.50ch03: 69939115-69953293 Solanum lycopersicum
Solyc03g121950.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 69939115-69944114 Solanum lycopersicum
Solyc03g121950.2 10.0kb upstream 10.0kb upstream 19179 true SL2.50ch03: 69944115-69963293 Solanum lycopersicum
Solyc03g121950.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 69953294-69963293 Solanum lycopersicum
Solyc03g121950.2 10.0kb downstream 10.0kb downstream 19179 true SL2.50ch03: 69934115-69953293 Solanum lycopersicum
Solyc03g121950.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 69934115-69944114 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470674 5263 Asterids View MSA
123743281 5271 Pentapetalae View MSA
122790252 5272 Eudicot View MSA
122049882 5273 Angiosperm View MSA
121348132 5274 Embryophyte View MSA
123427801 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain