Gene : Solyc03g122340.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR11771:SF38 - LIPOXYGENASE 3, CHLOROPLASTIC-RELATED Description:  Lipoxygenase (AHRD V1 **** Q96574_SOLLC); contains Interpro domain(s) IPR001246 Lipoxygenase, plant
Genomic Order:  3277 Name:  ? Solyc03g122340.2
Secondary Identifier:  ? PAC:36135316
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-5410 Solanum lycopersicum pathologic  
Slycopersicum PWY-735 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g122340.2 0.5kb upstream 0.5kb upstream 4954 true SL2.50ch03: 70218160-70223113 Solanum lycopersicum
Solyc03g122340.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 70218160-70218659 Solanum lycopersicum
Solyc03g122340.2 0.5kb downstream 0.5kb downstream 4954 true SL2.50ch03: 70218660-70223613 Solanum lycopersicum
Solyc03g122340.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 70223114-70223613 Solanum lycopersicum
Solyc03g122340.2 1.0kb upstream 1.0kb upstream 5454 true SL2.50ch03: 70217660-70223113 Solanum lycopersicum
Solyc03g122340.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 70217660-70218659 Solanum lycopersicum
Solyc03g122340.2 1.0kb downstream 1.0kb downstream 5454 true SL2.50ch03: 70218660-70224113 Solanum lycopersicum
Solyc03g122340.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 70223114-70224113 Solanum lycopersicum
Solyc03g122340.2 2.0kb upstream 2.0kb upstream 6454 true SL2.50ch03: 70216660-70223113 Solanum lycopersicum
Solyc03g122340.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 70216660-70218659 Solanum lycopersicum
Solyc03g122340.2 2.0kb downstream 2.0kb downstream 6454 true SL2.50ch03: 70218660-70225113 Solanum lycopersicum
Solyc03g122340.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 70223114-70225113 Solanum lycopersicum
Solyc03g122340.2 5.0kb upstream 5.0kb upstream 9454 true SL2.50ch03: 70213660-70223113 Solanum lycopersicum
Solyc03g122340.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 70213660-70218659 Solanum lycopersicum
Solyc03g122340.2 5.0kb downstream 5.0kb downstream 9454 true SL2.50ch03: 70218660-70228113 Solanum lycopersicum
Solyc03g122340.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 70223114-70228113 Solanum lycopersicum
Solyc03g122340.2 10.0kb upstream 10.0kb upstream 14454 true SL2.50ch03: 70208660-70223113 Solanum lycopersicum
Solyc03g122340.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 70208660-70218659 Solanum lycopersicum
Solyc03g122340.2 10.0kb downstream 10.0kb downstream 14454 true SL2.50ch03: 70218660-70233113 Solanum lycopersicum
Solyc03g122340.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 70223114-70233113 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470083 5263 Asterids View MSA
123743150 5271 Pentapetalae View MSA
122789243 5272 Eudicot View MSA
122051623 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain