Gene : Solyc09g007310.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR11254:SF350 - E3 UBIQUITIN-PROTEIN LIGASE UPL4 Description:  Ubiquitin-protein ligase 4 (AHRD V1 **** D7M7X1_ARALY); contains Interpro domain(s) IPR000569 HECT
Genomic Order:  133 Name:  ? Solyc09g007310.2
Secondary Identifier:  ? PAC:36131598
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-7511 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc09g007310.2 0.5kb upstream 0.5kb upstream 9786 true SL2.50ch09: 907186-916971 Solanum lycopersicum
Solyc09g007310.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch09: 907186-907685 Solanum lycopersicum
Solyc09g007310.2 0.5kb downstream 0.5kb downstream 9786 true SL2.50ch09: 907686-917471 Solanum lycopersicum
Solyc09g007310.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch09: 916972-917471 Solanum lycopersicum
Solyc09g007310.2 1.0kb upstream 1.0kb upstream 10286 true SL2.50ch09: 906686-916971 Solanum lycopersicum
Solyc09g007310.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch09: 906686-907685 Solanum lycopersicum
Solyc09g007310.2 1.0kb downstream 1.0kb downstream 10286 true SL2.50ch09: 907686-917971 Solanum lycopersicum
Solyc09g007310.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch09: 916972-917971 Solanum lycopersicum
Solyc09g007310.2 2.0kb upstream 2.0kb upstream 11286 true SL2.50ch09: 905686-916971 Solanum lycopersicum
Solyc09g007310.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch09: 905686-907685 Solanum lycopersicum
Solyc09g007310.2 2.0kb downstream 2.0kb downstream 11286 true SL2.50ch09: 907686-918971 Solanum lycopersicum
Solyc09g007310.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch09: 916972-918971 Solanum lycopersicum
Solyc09g007310.2 5.0kb upstream 5.0kb upstream 14286 true SL2.50ch09: 902686-916971 Solanum lycopersicum
Solyc09g007310.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch09: 902686-907685 Solanum lycopersicum
Solyc09g007310.2 5.0kb downstream 5.0kb downstream 14286 true SL2.50ch09: 907686-921971 Solanum lycopersicum
Solyc09g007310.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch09: 916972-921971 Solanum lycopersicum
Solyc09g007310.2 10.0kb upstream 10.0kb upstream 19286 true SL2.50ch09: 897686-916971 Solanum lycopersicum
Solyc09g007310.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch09: 897686-907685 Solanum lycopersicum
Solyc09g007310.2 10.0kb downstream 10.0kb downstream 19286 true SL2.50ch09: 907686-926971 Solanum lycopersicum
Solyc09g007310.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch09: 916972-926971 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472496 5263 Asterids View MSA
123736938 5271 Pentapetalae View MSA
122796953 5272 Eudicot View MSA
122044351 5273 Angiosperm View MSA
121310283 5274 Embryophyte View MSA
123428406 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain