Gene : Solyc09g007200.2 S. lycopersicum ITAG2.4
Defline:  (1 of 174) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Description:  Pentatricopeptide repeat-containing protein (AHRD V1 ***- D7M7W8_ARALY); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat
Genomic Order:  122 Name:  ? Solyc09g007200.2
Secondary Identifier:  ? PAC:36132355
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc09g007200.2 0.5kb upstream 0.5kb upstream 10423 true SL2.50ch09: 816762-827184 Solanum lycopersicum
Solyc09g007200.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch09: 816762-817261 Solanum lycopersicum
Solyc09g007200.2 0.5kb downstream 0.5kb downstream 10423 true SL2.50ch09: 817262-827684 Solanum lycopersicum
Solyc09g007200.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch09: 827185-827684 Solanum lycopersicum
Solyc09g007200.2 1.0kb upstream 1.0kb upstream 10923 true SL2.50ch09: 816262-827184 Solanum lycopersicum
Solyc09g007200.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch09: 816262-817261 Solanum lycopersicum
Solyc09g007200.2 1.0kb downstream 1.0kb downstream 10923 true SL2.50ch09: 817262-828184 Solanum lycopersicum
Solyc09g007200.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch09: 827185-828184 Solanum lycopersicum
Solyc09g007200.2 2.0kb upstream 2.0kb upstream 11923 true SL2.50ch09: 815262-827184 Solanum lycopersicum
Solyc09g007200.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch09: 815262-817261 Solanum lycopersicum
Solyc09g007200.2 2.0kb downstream 2.0kb downstream 11923 true SL2.50ch09: 817262-829184 Solanum lycopersicum
Solyc09g007200.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch09: 827185-829184 Solanum lycopersicum
Solyc09g007200.2 5.0kb upstream 5.0kb upstream 14923 true SL2.50ch09: 812262-827184 Solanum lycopersicum
Solyc09g007200.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch09: 812262-817261 Solanum lycopersicum
Solyc09g007200.2 5.0kb downstream 5.0kb downstream 14923 true SL2.50ch09: 817262-832184 Solanum lycopersicum
Solyc09g007200.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch09: 827185-832184 Solanum lycopersicum
Solyc09g007200.2 10.0kb upstream 10.0kb upstream 19923 true SL2.50ch09: 807262-827184 Solanum lycopersicum
Solyc09g007200.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch09: 807262-817261 Solanum lycopersicum
Solyc09g007200.2 10.0kb downstream 10.0kb downstream 19923 true SL2.50ch09: 817262-837184 Solanum lycopersicum
Solyc09g007200.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch09: 827185-837184 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470362 5263 Asterids View MSA
123738487 5271 Pentapetalae View MSA
122789712 5272 Eudicot View MSA
122044126 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121347187 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain