Gene : Solyc09g005700.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) 5.1.1.7 - Diaminopimelate epimerase Description:  Diaminopimelate epimerase family protein (AHRD V1 **** D7LUJ8_ARALY); contains Interpro domain(s) IPR001653 Diaminopimelate epimerase
Genomic Order:  71 Name:  ? Solyc09g005700.2
Secondary Identifier:  ? PAC:36131466
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-5097 Solanum lycopersicum pathologic  
Slycopersicum PWY-724 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc09g005700.2 0.5kb upstream 0.5kb upstream 8308 true SL2.50ch09: 488084-496391 Solanum lycopersicum
Solyc09g005700.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch09: 495892-496391 Solanum lycopersicum
Solyc09g005700.2 0.5kb downstream 0.5kb downstream 8308 true SL2.50ch09: 487584-495891 Solanum lycopersicum
Solyc09g005700.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch09: 487584-488083 Solanum lycopersicum
Solyc09g005700.2 1.0kb upstream 1.0kb upstream 8808 true SL2.50ch09: 488084-496891 Solanum lycopersicum
Solyc09g005700.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch09: 495892-496891 Solanum lycopersicum
Solyc09g005700.2 1.0kb downstream 1.0kb downstream 8808 true SL2.50ch09: 487084-495891 Solanum lycopersicum
Solyc09g005700.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch09: 487084-488083 Solanum lycopersicum
Solyc09g005700.2 2.0kb upstream 2.0kb upstream 9808 true SL2.50ch09: 488084-497891 Solanum lycopersicum
Solyc09g005700.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch09: 495892-497891 Solanum lycopersicum
Solyc09g005700.2 2.0kb downstream 2.0kb downstream 9808 true SL2.50ch09: 486084-495891 Solanum lycopersicum
Solyc09g005700.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch09: 486084-488083 Solanum lycopersicum
Solyc09g005700.2 5.0kb upstream 5.0kb upstream 12808 true SL2.50ch09: 488084-500891 Solanum lycopersicum
Solyc09g005700.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch09: 495892-500891 Solanum lycopersicum
Solyc09g005700.2 5.0kb downstream 5.0kb downstream 12808 true SL2.50ch09: 483084-495891 Solanum lycopersicum
Solyc09g005700.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch09: 483084-488083 Solanum lycopersicum
Solyc09g005700.2 10.0kb upstream 10.0kb upstream 17808 true SL2.50ch09: 488084-505891 Solanum lycopersicum
Solyc09g005700.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch09: 495892-505891 Solanum lycopersicum
Solyc09g005700.2 10.0kb downstream 10.0kb downstream 17808 true SL2.50ch09: 478084-495891 Solanum lycopersicum
Solyc09g005700.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch09: 478084-488083 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477005 5263 Asterids View MSA
123740208 5271 Pentapetalae View MSA
122785704 5272 Eudicot View MSA
122047257 5273 Angiosperm View MSA
121347599 5274 Embryophyte View MSA
123423863 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain