Gene : Solyc03g119330.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR12947:SF10 - AMSH-LIKE UBIQUITIN THIOESTERASE 1 Description:  26S proteasome regulatory subunit (AHRD V1 *--- A7EKH5_SCLS1); contains Interpro domain(s) IPR000555 Mov34/MPN/PAD-1
Genomic Order:  2976 Name:  ? Solyc03g119330.2
Secondary Identifier:  ? PAC:36135067
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g119330.2 0.5kb upstream 0.5kb upstream 8038 true SL2.50ch03: 67971059-67979096 Solanum lycopersicum
Solyc03g119330.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 67978597-67979096 Solanum lycopersicum
Solyc03g119330.2 0.5kb downstream 0.5kb downstream 8038 true SL2.50ch03: 67970559-67978596 Solanum lycopersicum
Solyc03g119330.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 67970559-67971058 Solanum lycopersicum
Solyc03g119330.2 1.0kb upstream 1.0kb upstream 8538 true SL2.50ch03: 67971059-67979596 Solanum lycopersicum
Solyc03g119330.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 67978597-67979596 Solanum lycopersicum
Solyc03g119330.2 1.0kb downstream 1.0kb downstream 8538 true SL2.50ch03: 67970059-67978596 Solanum lycopersicum
Solyc03g119330.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 67970059-67971058 Solanum lycopersicum
Solyc03g119330.2 2.0kb upstream 2.0kb upstream 9538 true SL2.50ch03: 67971059-67980596 Solanum lycopersicum
Solyc03g119330.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 67978597-67980596 Solanum lycopersicum
Solyc03g119330.2 2.0kb downstream 2.0kb downstream 9538 true SL2.50ch03: 67969059-67978596 Solanum lycopersicum
Solyc03g119330.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 67969059-67971058 Solanum lycopersicum
Solyc03g119330.2 5.0kb upstream 5.0kb upstream 12538 true SL2.50ch03: 67971059-67983596 Solanum lycopersicum
Solyc03g119330.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 67978597-67983596 Solanum lycopersicum
Solyc03g119330.2 5.0kb downstream 5.0kb downstream 12538 true SL2.50ch03: 67966059-67978596 Solanum lycopersicum
Solyc03g119330.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 67966059-67971058 Solanum lycopersicum
Solyc03g119330.2 10.0kb upstream 10.0kb upstream 17538 true SL2.50ch03: 67971059-67988596 Solanum lycopersicum
Solyc03g119330.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 67978597-67988596 Solanum lycopersicum
Solyc03g119330.2 10.0kb downstream 10.0kb downstream 17538 true SL2.50ch03: 67961059-67978596 Solanum lycopersicum
Solyc03g119330.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 67961059-67971058 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475018 5263 Asterids View MSA
123740855 5271 Pentapetalae View MSA
122786605 5272 Eudicot View MSA
122049356 5273 Angiosperm View MSA
121351478 5274 Embryophyte View MSA
123425499 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain