Gene : Solyc03g119280.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR11476:SF5 - CLASS II AARS AND BIOTIN SYNTHETASES SUPERFAMILY PROTEIN-RELATED Description:  Histidyl-tRNA synthetase 1 (AHRD V1 ***- D7LWN6_ARALY); contains Interpro domain(s) IPR015807 Histidyl-tRNA synthetase, class IIa, subgroup
Genomic Order:  2971 Name:  ? Solyc03g119280.2
Secondary Identifier:  ? PAC:36135185
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum TRNA-CHARGING-PWY Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g119280.2 0.5kb upstream 0.5kb upstream 9161 true SL2.50ch03: 67910921-67920081 Solanum lycopersicum
Solyc03g119280.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 67919582-67920081 Solanum lycopersicum
Solyc03g119280.2 0.5kb downstream 0.5kb downstream 9161 true SL2.50ch03: 67910421-67919581 Solanum lycopersicum
Solyc03g119280.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 67910421-67910920 Solanum lycopersicum
Solyc03g119280.2 1.0kb upstream 1.0kb upstream 9661 true SL2.50ch03: 67910921-67920581 Solanum lycopersicum
Solyc03g119280.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 67919582-67920581 Solanum lycopersicum
Solyc03g119280.2 1.0kb downstream 1.0kb downstream 9661 true SL2.50ch03: 67909921-67919581 Solanum lycopersicum
Solyc03g119280.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 67909921-67910920 Solanum lycopersicum
Solyc03g119280.2 2.0kb upstream 2.0kb upstream 10661 true SL2.50ch03: 67910921-67921581 Solanum lycopersicum
Solyc03g119280.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 67919582-67921581 Solanum lycopersicum
Solyc03g119280.2 2.0kb downstream 2.0kb downstream 10661 true SL2.50ch03: 67908921-67919581 Solanum lycopersicum
Solyc03g119280.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 67908921-67910920 Solanum lycopersicum
Solyc03g119280.2 5.0kb upstream 5.0kb upstream 13661 true SL2.50ch03: 67910921-67924581 Solanum lycopersicum
Solyc03g119280.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 67919582-67924581 Solanum lycopersicum
Solyc03g119280.2 5.0kb downstream 5.0kb downstream 13661 true SL2.50ch03: 67905921-67919581 Solanum lycopersicum
Solyc03g119280.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 67905921-67910920 Solanum lycopersicum
Solyc03g119280.2 10.0kb upstream 10.0kb upstream 18661 true SL2.50ch03: 67910921-67929581 Solanum lycopersicum
Solyc03g119280.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 67919582-67929581 Solanum lycopersicum
Solyc03g119280.2 10.0kb downstream 10.0kb downstream 18661 true SL2.50ch03: 67900921-67919581 Solanum lycopersicum
Solyc03g119280.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 67900921-67910920 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472475 5263 Asterids View MSA
123739559 5271 Pentapetalae View MSA
122792579 5272 Eudicot View MSA
122042038 5273 Angiosperm View MSA
121344697 5274 Embryophyte View MSA
123424484 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain