Gene : Solyc03g121260.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) 2.1.1.189 - 23S rRNA (uracil(747)-C(5))-methyltransferase Description:  23S rRNA (Uracil-5-)-methyltransferase RumA (AHRD V1 **** D8F5E6_9DELT); contains Interpro domain(s) IPR001566 23S rRNA methyltransferase/RumA
Genomic Order:  3169 Name:  ? Solyc03g121260.2
Secondary Identifier:  ? PAC:36135679
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g121260.2 0.5kb upstream 0.5kb upstream 6780 true SL2.50ch03: 69421394-69428173 Solanum lycopersicum
Solyc03g121260.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 69427674-69428173 Solanum lycopersicum
Solyc03g121260.2 0.5kb downstream 0.5kb downstream 6780 true SL2.50ch03: 69420894-69427673 Solanum lycopersicum
Solyc03g121260.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 69420894-69421393 Solanum lycopersicum
Solyc03g121260.2 1.0kb upstream 1.0kb upstream 7280 true SL2.50ch03: 69421394-69428673 Solanum lycopersicum
Solyc03g121260.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 69427674-69428673 Solanum lycopersicum
Solyc03g121260.2 1.0kb downstream 1.0kb downstream 7280 true SL2.50ch03: 69420394-69427673 Solanum lycopersicum
Solyc03g121260.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 69420394-69421393 Solanum lycopersicum
Solyc03g121260.2 2.0kb upstream 2.0kb upstream 8280 true SL2.50ch03: 69421394-69429673 Solanum lycopersicum
Solyc03g121260.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 69427674-69429673 Solanum lycopersicum
Solyc03g121260.2 2.0kb downstream 2.0kb downstream 8280 true SL2.50ch03: 69419394-69427673 Solanum lycopersicum
Solyc03g121260.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 69419394-69421393 Solanum lycopersicum
Solyc03g121260.2 5.0kb upstream 5.0kb upstream 11280 true SL2.50ch03: 69421394-69432673 Solanum lycopersicum
Solyc03g121260.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 69427674-69432673 Solanum lycopersicum
Solyc03g121260.2 5.0kb downstream 5.0kb downstream 11280 true SL2.50ch03: 69416394-69427673 Solanum lycopersicum
Solyc03g121260.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 69416394-69421393 Solanum lycopersicum
Solyc03g121260.2 10.0kb upstream 10.0kb upstream 16280 true SL2.50ch03: 69421394-69437673 Solanum lycopersicum
Solyc03g121260.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 69427674-69437673 Solanum lycopersicum
Solyc03g121260.2 10.0kb downstream 10.0kb downstream 16280 true SL2.50ch03: 69411394-69427673 Solanum lycopersicum
Solyc03g121260.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 69411394-69421393 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468364 5263 Asterids View MSA
123737477 5271 Pentapetalae View MSA
122788250 5272 Eudicot View MSA
122042152 5273 Angiosperm View MSA
121345091 5274 Embryophyte View MSA
123424748 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain