Gene : Solyc03g117260.1 S. lycopersicum ITAG2.4
Defline:  (1 of 24) PF03140 - Plant protein of unknown function (DUF247) Description:  Pentatricopeptide (PPR) repeat-containing protein-like (AHRD V1 **-- Q6ZCP9_ORYSJ); contains Interpro domain(s) IPR004158 Protein of unknown function DUF247, plant
Genomic Order:  2771 Name:  ? Solyc03g117260.1
Secondary Identifier:  ? PAC:36136668
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g117260.1 0.5kb upstream 0.5kb upstream 2257 true SL2.50ch03: 66441883-66444139 Solanum lycopersicum
Solyc03g117260.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 66441883-66442382 Solanum lycopersicum
Solyc03g117260.1 0.5kb downstream 0.5kb downstream 2257 true SL2.50ch03: 66442383-66444639 Solanum lycopersicum
Solyc03g117260.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 66444140-66444639 Solanum lycopersicum
Solyc03g117260.1 1.0kb upstream 1.0kb upstream 2757 true SL2.50ch03: 66441383-66444139 Solanum lycopersicum
Solyc03g117260.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 66441383-66442382 Solanum lycopersicum
Solyc03g117260.1 1.0kb downstream 1.0kb downstream 2757 true SL2.50ch03: 66442383-66445139 Solanum lycopersicum
Solyc03g117260.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 66444140-66445139 Solanum lycopersicum
Solyc03g117260.1 2.0kb upstream 2.0kb upstream 3757 true SL2.50ch03: 66440383-66444139 Solanum lycopersicum
Solyc03g117260.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 66440383-66442382 Solanum lycopersicum
Solyc03g117260.1 2.0kb downstream 2.0kb downstream 3757 true SL2.50ch03: 66442383-66446139 Solanum lycopersicum
Solyc03g117260.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 66444140-66446139 Solanum lycopersicum
Solyc03g117260.1 5.0kb upstream 5.0kb upstream 6757 true SL2.50ch03: 66437383-66444139 Solanum lycopersicum
Solyc03g117260.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 66437383-66442382 Solanum lycopersicum
Solyc03g117260.1 5.0kb downstream 5.0kb downstream 6757 true SL2.50ch03: 66442383-66449139 Solanum lycopersicum
Solyc03g117260.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 66444140-66449139 Solanum lycopersicum
Solyc03g117260.1 10.0kb upstream 10.0kb upstream 11757 true SL2.50ch03: 66432383-66444139 Solanum lycopersicum
Solyc03g117260.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 66432383-66442382 Solanum lycopersicum
Solyc03g117260.1 10.0kb downstream 10.0kb downstream 11757 true SL2.50ch03: 66442383-66454139 Solanum lycopersicum
Solyc03g117260.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 66444140-66454139 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477756 5263 Asterids View MSA
123747336 5271 Pentapetalae View MSA
122785819 5272 Eudicot View MSA
122047273 5273 Angiosperm View MSA
121351531 5274 Embryophyte View MSA
123382209 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain