Gene : Solyc03g117120.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR23198:SF0 - NUCLEAR PORE COMPLEX PROTEIN NUP96 HOMOLOG Description:  Nucleoporin (Fragment) (AHRD V1 *--- Q677F1_HYAOR); contains Interpro domain(s) IPR007230 Peptidase S59, nucleoporin
Genomic Order:  2757 Name:  ? Solyc03g117120.2
Secondary Identifier:  ? PAC:36134382
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g117120.2 0.5kb upstream 0.5kb upstream 8131 true SL2.50ch03: 66366208-66374338 Solanum lycopersicum
Solyc03g117120.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 66373839-66374338 Solanum lycopersicum
Solyc03g117120.2 0.5kb downstream 0.5kb downstream 8131 true SL2.50ch03: 66365708-66373838 Solanum lycopersicum
Solyc03g117120.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 66365708-66366207 Solanum lycopersicum
Solyc03g117120.2 1.0kb upstream 1.0kb upstream 8631 true SL2.50ch03: 66366208-66374838 Solanum lycopersicum
Solyc03g117120.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 66373839-66374838 Solanum lycopersicum
Solyc03g117120.2 1.0kb downstream 1.0kb downstream 8631 true SL2.50ch03: 66365208-66373838 Solanum lycopersicum
Solyc03g117120.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 66365208-66366207 Solanum lycopersicum
Solyc03g117120.2 2.0kb upstream 2.0kb upstream 9631 true SL2.50ch03: 66366208-66375838 Solanum lycopersicum
Solyc03g117120.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 66373839-66375838 Solanum lycopersicum
Solyc03g117120.2 2.0kb downstream 2.0kb downstream 9631 true SL2.50ch03: 66364208-66373838 Solanum lycopersicum
Solyc03g117120.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 66364208-66366207 Solanum lycopersicum
Solyc03g117120.2 5.0kb upstream 5.0kb upstream 12631 true SL2.50ch03: 66366208-66378838 Solanum lycopersicum
Solyc03g117120.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 66373839-66378838 Solanum lycopersicum
Solyc03g117120.2 5.0kb downstream 5.0kb downstream 12631 true SL2.50ch03: 66361208-66373838 Solanum lycopersicum
Solyc03g117120.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 66361208-66366207 Solanum lycopersicum
Solyc03g117120.2 10.0kb upstream 10.0kb upstream 17631 true SL2.50ch03: 66366208-66383838 Solanum lycopersicum
Solyc03g117120.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 66373839-66383838 Solanum lycopersicum
Solyc03g117120.2 10.0kb downstream 10.0kb downstream 17631 true SL2.50ch03: 66356208-66373838 Solanum lycopersicum
Solyc03g117120.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 66356208-66366207 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474701 5263 Asterids View MSA
123738828 5271 Pentapetalae View MSA
122786921 5272 Eudicot View MSA
122043247 5273 Angiosperm View MSA
121310093 5274 Embryophyte View MSA
123347679 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain