Gene : Solyc03g117730.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR16517:SF27 - TUBBY-LIKE PROTEIN 8 Description:  Tubby-like protein 13 (AHRD V1 ***- D2CMM7_ORYSJ); contains Interpro domain(s) IPR000007 Tubby, C-terminal
Genomic Order:  2818 Name:  ? Solyc03g117730.2
Secondary Identifier:  ? PAC:36134143
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g117730.2 0.5kb upstream 0.5kb upstream 3790 true SL2.50ch03: 66779750-66783539 Solanum lycopersicum
Solyc03g117730.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 66783040-66783539 Solanum lycopersicum
Solyc03g117730.2 0.5kb downstream 0.5kb downstream 3790 true SL2.50ch03: 66779250-66783039 Solanum lycopersicum
Solyc03g117730.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 66779250-66779749 Solanum lycopersicum
Solyc03g117730.2 1.0kb upstream 1.0kb upstream 4290 true SL2.50ch03: 66779750-66784039 Solanum lycopersicum
Solyc03g117730.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 66783040-66784039 Solanum lycopersicum
Solyc03g117730.2 1.0kb downstream 1.0kb downstream 4290 true SL2.50ch03: 66778750-66783039 Solanum lycopersicum
Solyc03g117730.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 66778750-66779749 Solanum lycopersicum
Solyc03g117730.2 2.0kb upstream 2.0kb upstream 5290 true SL2.50ch03: 66779750-66785039 Solanum lycopersicum
Solyc03g117730.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 66783040-66785039 Solanum lycopersicum
Solyc03g117730.2 2.0kb downstream 2.0kb downstream 5290 true SL2.50ch03: 66777750-66783039 Solanum lycopersicum
Solyc03g117730.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 66777750-66779749 Solanum lycopersicum
Solyc03g117730.2 5.0kb upstream 5.0kb upstream 8290 true SL2.50ch03: 66779750-66788039 Solanum lycopersicum
Solyc03g117730.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 66783040-66788039 Solanum lycopersicum
Solyc03g117730.2 5.0kb downstream 5.0kb downstream 8290 true SL2.50ch03: 66774750-66783039 Solanum lycopersicum
Solyc03g117730.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 66774750-66779749 Solanum lycopersicum
Solyc03g117730.2 10.0kb upstream 10.0kb upstream 13290 true SL2.50ch03: 66779750-66793039 Solanum lycopersicum
Solyc03g117730.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 66783040-66793039 Solanum lycopersicum
Solyc03g117730.2 10.0kb downstream 10.0kb downstream 13290 true SL2.50ch03: 66769750-66783039 Solanum lycopersicum
Solyc03g117730.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 66769750-66779749 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473938 5263 Asterids View MSA
123740290 5271 Pentapetalae View MSA
122793260 5272 Eudicot View MSA
122048608 5273 Angiosperm View MSA
121311037 5274 Embryophyte View MSA
123348391 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain