Gene : Solyc03g117510.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) 3.2.2.23 - DNA-formamidopyrimidine glycosylase / Formamidopyrimidine-DNA glycosylase Description:  Formamidopyrimidine-DNA glycosylase (AHRD V1 **** C5JTH8_AJEDS); contains Interpro domain(s) IPR000191 DNA glycosylase/AP lyase
Genomic Order:  2796 Name:  ? Solyc03g117510.2
Secondary Identifier:  ? PAC:36134196
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g117510.2 0.5kb upstream 0.5kb upstream 5525 true SL2.50ch03: 66648900-66654424 Solanum lycopersicum
Solyc03g117510.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 66648900-66649399 Solanum lycopersicum
Solyc03g117510.2 0.5kb downstream 0.5kb downstream 5525 true SL2.50ch03: 66649400-66654924 Solanum lycopersicum
Solyc03g117510.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 66654425-66654924 Solanum lycopersicum
Solyc03g117510.2 1.0kb upstream 1.0kb upstream 6025 true SL2.50ch03: 66648400-66654424 Solanum lycopersicum
Solyc03g117510.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 66648400-66649399 Solanum lycopersicum
Solyc03g117510.2 1.0kb downstream 1.0kb downstream 6025 true SL2.50ch03: 66649400-66655424 Solanum lycopersicum
Solyc03g117510.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 66654425-66655424 Solanum lycopersicum
Solyc03g117510.2 2.0kb upstream 2.0kb upstream 7025 true SL2.50ch03: 66647400-66654424 Solanum lycopersicum
Solyc03g117510.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 66647400-66649399 Solanum lycopersicum
Solyc03g117510.2 2.0kb downstream 2.0kb downstream 7025 true SL2.50ch03: 66649400-66656424 Solanum lycopersicum
Solyc03g117510.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 66654425-66656424 Solanum lycopersicum
Solyc03g117510.2 5.0kb upstream 5.0kb upstream 10025 true SL2.50ch03: 66644400-66654424 Solanum lycopersicum
Solyc03g117510.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 66644400-66649399 Solanum lycopersicum
Solyc03g117510.2 5.0kb downstream 5.0kb downstream 10025 true SL2.50ch03: 66649400-66659424 Solanum lycopersicum
Solyc03g117510.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 66654425-66659424 Solanum lycopersicum
Solyc03g117510.2 10.0kb upstream 10.0kb upstream 15025 true SL2.50ch03: 66639400-66654424 Solanum lycopersicum
Solyc03g117510.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 66639400-66649399 Solanum lycopersicum
Solyc03g117510.2 10.0kb downstream 10.0kb downstream 15025 true SL2.50ch03: 66649400-66664424 Solanum lycopersicum
Solyc03g117510.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 66654425-66664424 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472613 5263 Asterids View MSA
123741491 5271 Pentapetalae View MSA
122770061 5272 Eudicot View MSA
122048986 5273 Angiosperm View MSA
121348452 5274 Embryophyte View MSA
123427632 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain