Gene : Solyc03g118830.2 S. lycopersicum ITAG2.4

Defline:  (1 of 2) 1.3.99.5 - 3-oxo-5-alpha-steroid 4-dehydrogenase (acceptor) / Steroid 5-alpha-reductase Description:  Conserved transmembrane protein (AHRD V1 **-- A0PNM5_MYCUA); contains Interpro domain(s) IPR010721 Protein of unknown function DUF1295
Genomic Order:  2926 Name:  ? Solyc03g118830.2
Secondary Identifier:  ? PAC:36134582

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g118830.2 0.5kb upstream 0.5kb upstream 5382 true SL2.50ch03: 67629795-67635176 Solanum lycopersicum
Solyc03g118830.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 67634677-67635176 Solanum lycopersicum
Solyc03g118830.2 0.5kb downstream 0.5kb downstream 5382 true SL2.50ch03: 67629295-67634676 Solanum lycopersicum
Solyc03g118830.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 67629295-67629794 Solanum lycopersicum
Solyc03g118830.2 1.0kb upstream 1.0kb upstream 5882 true SL2.50ch03: 67629795-67635676 Solanum lycopersicum
Solyc03g118830.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 67634677-67635676 Solanum lycopersicum
Solyc03g118830.2 1.0kb downstream 1.0kb downstream 5882 true SL2.50ch03: 67628795-67634676 Solanum lycopersicum
Solyc03g118830.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 67628795-67629794 Solanum lycopersicum
Solyc03g118830.2 2.0kb upstream 2.0kb upstream 6882 true SL2.50ch03: 67629795-67636676 Solanum lycopersicum
Solyc03g118830.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 67634677-67636676 Solanum lycopersicum
Solyc03g118830.2 2.0kb downstream 2.0kb downstream 6882 true SL2.50ch03: 67627795-67634676 Solanum lycopersicum
Solyc03g118830.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 67627795-67629794 Solanum lycopersicum
Solyc03g118830.2 5.0kb upstream 5.0kb upstream 9882 true SL2.50ch03: 67629795-67639676 Solanum lycopersicum
Solyc03g118830.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 67634677-67639676 Solanum lycopersicum
Solyc03g118830.2 5.0kb downstream 5.0kb downstream 9882 true SL2.50ch03: 67624795-67634676 Solanum lycopersicum
Solyc03g118830.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 67624795-67629794 Solanum lycopersicum
Solyc03g118830.2 10.0kb upstream 10.0kb upstream 14882 true SL2.50ch03: 67629795-67644676 Solanum lycopersicum
Solyc03g118830.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 67634677-67644676 Solanum lycopersicum
Solyc03g118830.2 10.0kb downstream 10.0kb downstream 14882 true SL2.50ch03: 67619795-67634676 Solanum lycopersicum
Solyc03g118830.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 67619795-67629794 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121385182 5263 Asterids View MSA
123741182 5271 Pentapetalae View MSA
122795415 5272 Eudicot View MSA
122047658 5273 Angiosperm View MSA
123429173 5275 Viridiplantae View MSA
121351590 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain