Gene : Solyc03g117930.2 S. lycopersicum ITAG2.4
Defline:  (1 of 12) PF07899 - Frigida-like protein (Frigida) Description:  FRIGIDA (AHRD V1 ***- B0YZZ2_ARALP); contains Interpro domain(s) IPR012474 Frigida-like
Genomic Order:  2838 Name:  ? Solyc03g117930.2
Secondary Identifier:  ? PAC:36135955
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g117930.2 0.5kb upstream 0.5kb upstream 8033 true SL2.50ch03: 66910648-66918680 Solanum lycopersicum
Solyc03g117930.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 66910648-66911147 Solanum lycopersicum
Solyc03g117930.2 0.5kb downstream 0.5kb downstream 8033 true SL2.50ch03: 66911148-66919180 Solanum lycopersicum
Solyc03g117930.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 66918681-66919180 Solanum lycopersicum
Solyc03g117930.2 1.0kb upstream 1.0kb upstream 8533 true SL2.50ch03: 66910148-66918680 Solanum lycopersicum
Solyc03g117930.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 66910148-66911147 Solanum lycopersicum
Solyc03g117930.2 1.0kb downstream 1.0kb downstream 8533 true SL2.50ch03: 66911148-66919680 Solanum lycopersicum
Solyc03g117930.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 66918681-66919680 Solanum lycopersicum
Solyc03g117930.2 2.0kb upstream 2.0kb upstream 9533 true SL2.50ch03: 66909148-66918680 Solanum lycopersicum
Solyc03g117930.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 66909148-66911147 Solanum lycopersicum
Solyc03g117930.2 2.0kb downstream 2.0kb downstream 9533 true SL2.50ch03: 66911148-66920680 Solanum lycopersicum
Solyc03g117930.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 66918681-66920680 Solanum lycopersicum
Solyc03g117930.2 5.0kb upstream 5.0kb upstream 12533 true SL2.50ch03: 66906148-66918680 Solanum lycopersicum
Solyc03g117930.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 66906148-66911147 Solanum lycopersicum
Solyc03g117930.2 5.0kb downstream 5.0kb downstream 12533 true SL2.50ch03: 66911148-66923680 Solanum lycopersicum
Solyc03g117930.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 66918681-66923680 Solanum lycopersicum
Solyc03g117930.2 10.0kb upstream 10.0kb upstream 17533 true SL2.50ch03: 66901148-66918680 Solanum lycopersicum
Solyc03g117930.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 66901148-66911147 Solanum lycopersicum
Solyc03g117930.2 10.0kb downstream 10.0kb downstream 17533 true SL2.50ch03: 66911148-66928680 Solanum lycopersicum
Solyc03g117930.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 66918681-66928680 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470387 5263 Asterids View MSA
123746109 5271 Pentapetalae View MSA
122785719 5272 Eudicot View MSA
122043307 5273 Angiosperm View MSA
121310105 5274 Embryophyte View MSA
123347687 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain