Gene : Solyc09g082580.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR31351:SF4 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MWI23-RELATED Description:  Os12g0604200 protein (Fragment) (AHRD V1 *-*- Q0IM29_ORYSJ); contains Interpro domain(s) IPR008546 Protein of unknown function DUF828, plant
Genomic Order:  1997 Name:  ? Solyc09g082580.2
Secondary Identifier:  ? PAC:36131463
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc09g082580.2 0.5kb upstream 0.5kb upstream 4238 true SL2.50ch09: 68321541-68325778 Solanum lycopersicum
Solyc09g082580.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch09: 68321541-68322040 Solanum lycopersicum
Solyc09g082580.2 0.5kb downstream 0.5kb downstream 4238 true SL2.50ch09: 68322041-68326278 Solanum lycopersicum
Solyc09g082580.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch09: 68325779-68326278 Solanum lycopersicum
Solyc09g082580.2 1.0kb upstream 1.0kb upstream 4738 true SL2.50ch09: 68321041-68325778 Solanum lycopersicum
Solyc09g082580.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch09: 68321041-68322040 Solanum lycopersicum
Solyc09g082580.2 1.0kb downstream 1.0kb downstream 4738 true SL2.50ch09: 68322041-68326778 Solanum lycopersicum
Solyc09g082580.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch09: 68325779-68326778 Solanum lycopersicum
Solyc09g082580.2 2.0kb upstream 2.0kb upstream 5738 true SL2.50ch09: 68320041-68325778 Solanum lycopersicum
Solyc09g082580.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch09: 68320041-68322040 Solanum lycopersicum
Solyc09g082580.2 2.0kb downstream 2.0kb downstream 5738 true SL2.50ch09: 68322041-68327778 Solanum lycopersicum
Solyc09g082580.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch09: 68325779-68327778 Solanum lycopersicum
Solyc09g082580.2 5.0kb upstream 5.0kb upstream 8738 true SL2.50ch09: 68317041-68325778 Solanum lycopersicum
Solyc09g082580.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch09: 68317041-68322040 Solanum lycopersicum
Solyc09g082580.2 5.0kb downstream 5.0kb downstream 8738 true SL2.50ch09: 68322041-68330778 Solanum lycopersicum
Solyc09g082580.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch09: 68325779-68330778 Solanum lycopersicum
Solyc09g082580.2 10.0kb upstream 10.0kb upstream 13738 true SL2.50ch09: 68312041-68325778 Solanum lycopersicum
Solyc09g082580.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch09: 68312041-68322040 Solanum lycopersicum
Solyc09g082580.2 10.0kb downstream 10.0kb downstream 13738 true SL2.50ch09: 68322041-68335778 Solanum lycopersicum
Solyc09g082580.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch09: 68325779-68335778 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121414626 5263 Asterids View MSA
123746535 5271 Pentapetalae View MSA
122785782 5272 Eudicot View MSA
122047623 5273 Angiosperm View MSA
121348921 5274 Embryophyte View MSA
123381080 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain