Gene : Solyc09g075540.1 S. lycopersicum ITAG2.4
Defline:  (1 of 16) PF04833 - COBRA-like protein (COBRA) Description:  COBRA-like protein (AHRD V1 ***- Q655F2_ORYSJ); contains Interpro domain(s) IPR006918 Glycosyl-phosphatidyl inositol-anchored, plant
Genomic Order:  1893 Name:  ? Solyc09g075540.1
Secondary Identifier:  ? PAC:36133212
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc09g075540.1 0.5kb upstream 0.5kb upstream 2623 true SL2.50ch09: 67233996-67236618 Solanum lycopersicum
Solyc09g075540.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch09: 67236119-67236618 Solanum lycopersicum
Solyc09g075540.1 0.5kb downstream 0.5kb downstream 2623 true SL2.50ch09: 67233496-67236118 Solanum lycopersicum
Solyc09g075540.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch09: 67233496-67233995 Solanum lycopersicum
Solyc09g075540.1 1.0kb upstream 1.0kb upstream 3123 true SL2.50ch09: 67233996-67237118 Solanum lycopersicum
Solyc09g075540.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch09: 67236119-67237118 Solanum lycopersicum
Solyc09g075540.1 1.0kb downstream 1.0kb downstream 3123 true SL2.50ch09: 67232996-67236118 Solanum lycopersicum
Solyc09g075540.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch09: 67232996-67233995 Solanum lycopersicum
Solyc09g075540.1 2.0kb upstream 2.0kb upstream 4123 true SL2.50ch09: 67233996-67238118 Solanum lycopersicum
Solyc09g075540.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch09: 67236119-67238118 Solanum lycopersicum
Solyc09g075540.1 2.0kb downstream 2.0kb downstream 4123 true SL2.50ch09: 67231996-67236118 Solanum lycopersicum
Solyc09g075540.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch09: 67231996-67233995 Solanum lycopersicum
Solyc09g075540.1 5.0kb upstream 5.0kb upstream 7123 true SL2.50ch09: 67233996-67241118 Solanum lycopersicum
Solyc09g075540.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch09: 67236119-67241118 Solanum lycopersicum
Solyc09g075540.1 5.0kb downstream 5.0kb downstream 7123 true SL2.50ch09: 67228996-67236118 Solanum lycopersicum
Solyc09g075540.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch09: 67228996-67233995 Solanum lycopersicum
Solyc09g075540.1 10.0kb upstream 10.0kb upstream 12123 true SL2.50ch09: 67233996-67246118 Solanum lycopersicum
Solyc09g075540.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch09: 67236119-67246118 Solanum lycopersicum
Solyc09g075540.1 10.0kb downstream 10.0kb downstream 12123 true SL2.50ch09: 67223996-67236118 Solanum lycopersicum
Solyc09g075540.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch09: 67223996-67233995 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121414704 5263 Asterids View MSA
123753215 5271 Pentapetalae View MSA
122797556 5272 Eudicot View MSA
122048616 5273 Angiosperm View MSA
121351657 5274 Embryophyte View MSA
123382264 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain