Gene : Solyc09g089560.2 S. lycopersicum ITAG2.4
Defline:  (1 of 14) PF00917 - MATH domain (MATH) Description:  Ubiquitin carboxyl-terminal hydrolase family protein expressed (AHRD V1 *--- Q2R2A3_ORYSJ); contains Interpro domain(s) IPR002083 MATH
Genomic Order:  2098 Name:  ? Solyc09g089560.2
Secondary Identifier:  ? PAC:36132352
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc09g089560.2 0.5kb upstream 0.5kb upstream 12164 true SL2.50ch09: 69258262-69270425 Solanum lycopersicum
Solyc09g089560.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch09: 69269926-69270425 Solanum lycopersicum
Solyc09g089560.2 0.5kb downstream 0.5kb downstream 12164 true SL2.50ch09: 69257762-69269925 Solanum lycopersicum
Solyc09g089560.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch09: 69257762-69258261 Solanum lycopersicum
Solyc09g089560.2 1.0kb upstream 1.0kb upstream 12664 true SL2.50ch09: 69258262-69270925 Solanum lycopersicum
Solyc09g089560.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch09: 69269926-69270925 Solanum lycopersicum
Solyc09g089560.2 1.0kb downstream 1.0kb downstream 12664 true SL2.50ch09: 69257262-69269925 Solanum lycopersicum
Solyc09g089560.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch09: 69257262-69258261 Solanum lycopersicum
Solyc09g089560.2 2.0kb upstream 2.0kb upstream 13664 true SL2.50ch09: 69258262-69271925 Solanum lycopersicum
Solyc09g089560.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch09: 69269926-69271925 Solanum lycopersicum
Solyc09g089560.2 2.0kb downstream 2.0kb downstream 13664 true SL2.50ch09: 69256262-69269925 Solanum lycopersicum
Solyc09g089560.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch09: 69256262-69258261 Solanum lycopersicum
Solyc09g089560.2 5.0kb upstream 5.0kb upstream 16664 true SL2.50ch09: 69258262-69274925 Solanum lycopersicum
Solyc09g089560.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch09: 69269926-69274925 Solanum lycopersicum
Solyc09g089560.2 5.0kb downstream 5.0kb downstream 16664 true SL2.50ch09: 69253262-69269925 Solanum lycopersicum
Solyc09g089560.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch09: 69253262-69258261 Solanum lycopersicum
Solyc09g089560.2 10.0kb upstream 10.0kb upstream 21664 true SL2.50ch09: 69258262-69279925 Solanum lycopersicum
Solyc09g089560.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch09: 69269926-69279925 Solanum lycopersicum
Solyc09g089560.2 10.0kb downstream 10.0kb downstream 21664 true SL2.50ch09: 69248262-69269925 Solanum lycopersicum
Solyc09g089560.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch09: 69248262-69258261 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473645 5263 Asterids View MSA
123740151 5271 Pentapetalae View MSA
122794933 5272 Eudicot View MSA
122043519 5273 Angiosperm View MSA
121350769 5274 Embryophyte View MSA
123425613 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain