Gene : Solyc09g090330.2 S. lycopersicum ITAG2.4
Defline:  (1 of 14) PF04755 - PAP_fibrillin (PAP_fibrillin) Description:  Harpin binding protein 1 (AHRD V1 **-- Q5QJB4_SOLLC); contains Interpro domain(s) IPR006843 PAP fibrillin
Genomic Order:  2175 Name:  ? Solyc09g090330.2
Secondary Identifier:  ? PAC:36131555
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc09g090330.2 0.5kb upstream 0.5kb upstream 5177 true SL2.50ch09: 69841027-69846203 Solanum lycopersicum
Solyc09g090330.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch09: 69845704-69846203 Solanum lycopersicum
Solyc09g090330.2 0.5kb downstream 0.5kb downstream 5177 true SL2.50ch09: 69840527-69845703 Solanum lycopersicum
Solyc09g090330.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch09: 69840527-69841026 Solanum lycopersicum
Solyc09g090330.2 1.0kb upstream 1.0kb upstream 5677 true SL2.50ch09: 69841027-69846703 Solanum lycopersicum
Solyc09g090330.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch09: 69845704-69846703 Solanum lycopersicum
Solyc09g090330.2 1.0kb downstream 1.0kb downstream 5677 true SL2.50ch09: 69840027-69845703 Solanum lycopersicum
Solyc09g090330.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch09: 69840027-69841026 Solanum lycopersicum
Solyc09g090330.2 2.0kb upstream 2.0kb upstream 6677 true SL2.50ch09: 69841027-69847703 Solanum lycopersicum
Solyc09g090330.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch09: 69845704-69847703 Solanum lycopersicum
Solyc09g090330.2 2.0kb downstream 2.0kb downstream 6677 true SL2.50ch09: 69839027-69845703 Solanum lycopersicum
Solyc09g090330.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch09: 69839027-69841026 Solanum lycopersicum
Solyc09g090330.2 5.0kb upstream 5.0kb upstream 9677 true SL2.50ch09: 69841027-69850703 Solanum lycopersicum
Solyc09g090330.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch09: 69845704-69850703 Solanum lycopersicum
Solyc09g090330.2 5.0kb downstream 5.0kb downstream 9677 true SL2.50ch09: 69836027-69845703 Solanum lycopersicum
Solyc09g090330.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch09: 69836027-69841026 Solanum lycopersicum
Solyc09g090330.2 10.0kb upstream 10.0kb upstream 14677 true SL2.50ch09: 69841027-69855703 Solanum lycopersicum
Solyc09g090330.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch09: 69845704-69855703 Solanum lycopersicum
Solyc09g090330.2 10.0kb downstream 10.0kb downstream 14677 true SL2.50ch09: 69831027-69845703 Solanum lycopersicum
Solyc09g090330.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch09: 69831027-69841026 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468433 5263 Asterids View MSA
123753457 5271 Pentapetalae View MSA
122789473 5272 Eudicot View MSA
122042297 5273 Angiosperm View MSA
121345801 5274 Embryophyte View MSA
123427802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain