Gene : Solyc09g083080.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) K14565 - nucleolar protein 58 (NOP58) Description:  Nucleolar protein 5 (AHRD V1 ***- Q6P364_XENTR); contains Interpro domain(s) IPR002687 Pre-mRNA processing ribonucleoprotein, binding region
Genomic Order:  2048 Name:  ? Solyc09g083080.2
Secondary Identifier:  ? PAC:36133068
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc09g083080.2 0.5kb upstream 0.5kb upstream 4518 true SL2.50ch09: 68744153-68748670 Solanum lycopersicum
Solyc09g083080.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch09: 68748171-68748670 Solanum lycopersicum
Solyc09g083080.2 0.5kb downstream 0.5kb downstream 4518 true SL2.50ch09: 68743653-68748170 Solanum lycopersicum
Solyc09g083080.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch09: 68743653-68744152 Solanum lycopersicum
Solyc09g083080.2 1.0kb upstream 1.0kb upstream 5018 true SL2.50ch09: 68744153-68749170 Solanum lycopersicum
Solyc09g083080.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch09: 68748171-68749170 Solanum lycopersicum
Solyc09g083080.2 1.0kb downstream 1.0kb downstream 5018 true SL2.50ch09: 68743153-68748170 Solanum lycopersicum
Solyc09g083080.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch09: 68743153-68744152 Solanum lycopersicum
Solyc09g083080.2 2.0kb upstream 2.0kb upstream 6018 true SL2.50ch09: 68744153-68750170 Solanum lycopersicum
Solyc09g083080.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch09: 68748171-68750170 Solanum lycopersicum
Solyc09g083080.2 2.0kb downstream 2.0kb downstream 6018 true SL2.50ch09: 68742153-68748170 Solanum lycopersicum
Solyc09g083080.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch09: 68742153-68744152 Solanum lycopersicum
Solyc09g083080.2 5.0kb upstream 5.0kb upstream 9018 true SL2.50ch09: 68744153-68753170 Solanum lycopersicum
Solyc09g083080.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch09: 68748171-68753170 Solanum lycopersicum
Solyc09g083080.2 5.0kb downstream 5.0kb downstream 9018 true SL2.50ch09: 68739153-68748170 Solanum lycopersicum
Solyc09g083080.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch09: 68739153-68744152 Solanum lycopersicum
Solyc09g083080.2 10.0kb upstream 10.0kb upstream 14018 true SL2.50ch09: 68744153-68758170 Solanum lycopersicum
Solyc09g083080.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch09: 68748171-68758170 Solanum lycopersicum
Solyc09g083080.2 10.0kb downstream 10.0kb downstream 14018 true SL2.50ch09: 68734153-68748170 Solanum lycopersicum
Solyc09g083080.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch09: 68734153-68744152 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041003 5273 Angiosperm View MSA
121469579 5263 Asterids View MSA
123744603 5271 Pentapetalae View MSA
122786975 5272 Eudicot View MSA
121345420 5274 Embryophyte View MSA
123426153 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain