Gene : Solyc09g064390.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR22904:SF312 - CARBOXYLATE CLAMP-TETRATRICOPEPTIDE REPEAT PROTEIN Description:  Tetratricopeptide repeat protein 4 (AHRD V1 **-- B0WYL6_CULQU); contains Interpro domain(s) IPR011990 Tetratricopeptide-like helical
Genomic Order:  1478 Name:  ? Solyc09g064390.2
Secondary Identifier:  ? PAC:36132078
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc09g064390.2 0.5kb upstream 0.5kb upstream 4857 true SL2.50ch09: 61561701-61566557 Solanum lycopersicum
Solyc09g064390.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch09: 61566058-61566557 Solanum lycopersicum
Solyc09g064390.2 0.5kb downstream 0.5kb downstream 4857 true SL2.50ch09: 61561201-61566057 Solanum lycopersicum
Solyc09g064390.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch09: 61561201-61561700 Solanum lycopersicum
Solyc09g064390.2 1.0kb upstream 1.0kb upstream 5357 true SL2.50ch09: 61561701-61567057 Solanum lycopersicum
Solyc09g064390.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch09: 61566058-61567057 Solanum lycopersicum
Solyc09g064390.2 1.0kb downstream 1.0kb downstream 5357 true SL2.50ch09: 61560701-61566057 Solanum lycopersicum
Solyc09g064390.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch09: 61560701-61561700 Solanum lycopersicum
Solyc09g064390.2 2.0kb upstream 2.0kb upstream 6357 true SL2.50ch09: 61561701-61568057 Solanum lycopersicum
Solyc09g064390.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch09: 61566058-61568057 Solanum lycopersicum
Solyc09g064390.2 2.0kb downstream 2.0kb downstream 6357 true SL2.50ch09: 61559701-61566057 Solanum lycopersicum
Solyc09g064390.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch09: 61559701-61561700 Solanum lycopersicum
Solyc09g064390.2 5.0kb upstream 5.0kb upstream 9357 true SL2.50ch09: 61561701-61571057 Solanum lycopersicum
Solyc09g064390.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch09: 61566058-61571057 Solanum lycopersicum
Solyc09g064390.2 5.0kb downstream 5.0kb downstream 9357 true SL2.50ch09: 61556701-61566057 Solanum lycopersicum
Solyc09g064390.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch09: 61556701-61561700 Solanum lycopersicum
Solyc09g064390.2 10.0kb upstream 10.0kb upstream 14357 true SL2.50ch09: 61561701-61576057 Solanum lycopersicum
Solyc09g064390.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch09: 61566058-61576057 Solanum lycopersicum
Solyc09g064390.2 10.0kb downstream 10.0kb downstream 14357 true SL2.50ch09: 61551701-61566057 Solanum lycopersicum
Solyc09g064390.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch09: 61551701-61561700 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471220 5263 Asterids View MSA
123752266 5271 Pentapetalae View MSA
122787898 5272 Eudicot View MSA
122046706 5273 Angiosperm View MSA
121343893 5274 Embryophyte View MSA
123425417 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain