Gene : Solyc09g074100.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) 2.8.1.4//2.8.1.7 - tRNA sulfurtransferase // Cysteine desulfurase / Cysteine desulfurylase Description:  tRNA-specific 2-thiouridylase mnmA (AHRD V1 **** A6DKA8_9BACT); contains Interpro domain(s) IPR018318 tRNA methyl transferase-like
Genomic Order:  1749 Name:  ? Solyc09g074100.2
Secondary Identifier:  ? PAC:36132197
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY0-1021 Solanum lycopersicum pathologic  
Slycopersicum PWY-6823 Solanum lycopersicum pathologic  
Slycopersicum PWY-7250 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc09g074100.2 0.5kb upstream 0.5kb upstream 8447 true SL2.50ch09: 65774900-65783346 Solanum lycopersicum
Solyc09g074100.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch09: 65782847-65783346 Solanum lycopersicum
Solyc09g074100.2 0.5kb downstream 0.5kb downstream 8447 true SL2.50ch09: 65774400-65782846 Solanum lycopersicum
Solyc09g074100.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch09: 65774400-65774899 Solanum lycopersicum
Solyc09g074100.2 1.0kb upstream 1.0kb upstream 8947 true SL2.50ch09: 65774900-65783846 Solanum lycopersicum
Solyc09g074100.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch09: 65782847-65783846 Solanum lycopersicum
Solyc09g074100.2 1.0kb downstream 1.0kb downstream 8947 true SL2.50ch09: 65773900-65782846 Solanum lycopersicum
Solyc09g074100.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch09: 65773900-65774899 Solanum lycopersicum
Solyc09g074100.2 2.0kb upstream 2.0kb upstream 9947 true SL2.50ch09: 65774900-65784846 Solanum lycopersicum
Solyc09g074100.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch09: 65782847-65784846 Solanum lycopersicum
Solyc09g074100.2 2.0kb downstream 2.0kb downstream 9947 true SL2.50ch09: 65772900-65782846 Solanum lycopersicum
Solyc09g074100.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch09: 65772900-65774899 Solanum lycopersicum
Solyc09g074100.2 5.0kb upstream 5.0kb upstream 12947 true SL2.50ch09: 65774900-65787846 Solanum lycopersicum
Solyc09g074100.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch09: 65782847-65787846 Solanum lycopersicum
Solyc09g074100.2 5.0kb downstream 5.0kb downstream 12947 true SL2.50ch09: 65769900-65782846 Solanum lycopersicum
Solyc09g074100.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch09: 65769900-65774899 Solanum lycopersicum
Solyc09g074100.2 10.0kb upstream 10.0kb upstream 17947 true SL2.50ch09: 65774900-65792846 Solanum lycopersicum
Solyc09g074100.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch09: 65782847-65792846 Solanum lycopersicum
Solyc09g074100.2 10.0kb downstream 10.0kb downstream 17947 true SL2.50ch09: 65764900-65782846 Solanum lycopersicum
Solyc09g074100.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch09: 65764900-65774899 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472219 5263 Asterids View MSA
123736557 5271 Pentapetalae View MSA
122792411 5272 Eudicot View MSA
122044530 5273 Angiosperm View MSA
121345192 5274 Embryophyte View MSA
123427133 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain