Gene : Solyc09g055890.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR11771//PTHR11771:SF59 - LIPOXYGENASE // SUBFAMILY NOT NAMED Description:  Lipoxygenase (AHRD V1 ***- B9SMP7_RICCO); contains Interpro domain(s) IPR001246 Lipoxygenase, plant
Genomic Order:  1142 Name:  ? Solyc09g055890.2
Secondary Identifier:  ? PAC:36132454
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-5406 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc09g055890.2 0.5kb upstream 0.5kb upstream 3007 true SL2.50ch09: 46063089-46066095 Solanum lycopersicum
Solyc09g055890.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch09: 46063089-46063588 Solanum lycopersicum
Solyc09g055890.2 0.5kb downstream 0.5kb downstream 3007 true SL2.50ch09: 46063589-46066595 Solanum lycopersicum
Solyc09g055890.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch09: 46066096-46066595 Solanum lycopersicum
Solyc09g055890.2 1.0kb upstream 1.0kb upstream 3507 true SL2.50ch09: 46062589-46066095 Solanum lycopersicum
Solyc09g055890.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch09: 46062589-46063588 Solanum lycopersicum
Solyc09g055890.2 1.0kb downstream 1.0kb downstream 3507 true SL2.50ch09: 46063589-46067095 Solanum lycopersicum
Solyc09g055890.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch09: 46066096-46067095 Solanum lycopersicum
Solyc09g055890.2 2.0kb upstream 2.0kb upstream 4507 true SL2.50ch09: 46061589-46066095 Solanum lycopersicum
Solyc09g055890.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch09: 46061589-46063588 Solanum lycopersicum
Solyc09g055890.2 2.0kb downstream 2.0kb downstream 4507 true SL2.50ch09: 46063589-46068095 Solanum lycopersicum
Solyc09g055890.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch09: 46066096-46068095 Solanum lycopersicum
Solyc09g055890.2 5.0kb upstream 5.0kb upstream 7507 true SL2.50ch09: 46058589-46066095 Solanum lycopersicum
Solyc09g055890.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch09: 46058589-46063588 Solanum lycopersicum
Solyc09g055890.2 5.0kb downstream 5.0kb downstream 7507 true SL2.50ch09: 46063589-46071095 Solanum lycopersicum
Solyc09g055890.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch09: 46066096-46071095 Solanum lycopersicum
Solyc09g055890.2 10.0kb upstream 10.0kb upstream 12507 true SL2.50ch09: 46053589-46066095 Solanum lycopersicum
Solyc09g055890.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch09: 46053589-46063588 Solanum lycopersicum
Solyc09g055890.2 10.0kb downstream 10.0kb downstream 12507 true SL2.50ch09: 46063589-46076095 Solanum lycopersicum
Solyc09g055890.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch09: 46066096-46076095 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121387736 5263 Asterids View MSA
123750052 5271 Pentapetalae View MSA
122773445 5272 Eudicot View MSA
122049504 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain