Gene : Solyc09g056450.2 S. lycopersicum ITAG2.4
Defline:  (1 of 3) PTHR23315:SF75 - U-BOX DOMAIN-CONTAINING PROTEIN 9 Description:  U-box domain-containing protein (AHRD V1 **-- D7KBV1_ARALY); contains Interpro domain(s) IPR011989 Armadillo-like helical
Genomic Order:  1196 Name:  ? Solyc09g056450.2
Secondary Identifier:  ? PAC:36131653
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-7511 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc09g056450.2 0.5kb upstream 0.5kb upstream 2632 true SL2.50ch09: 49222360-49224991 Solanum lycopersicum
Solyc09g056450.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch09: 49224492-49224991 Solanum lycopersicum
Solyc09g056450.2 0.5kb downstream 0.5kb downstream 2632 true SL2.50ch09: 49221860-49224491 Solanum lycopersicum
Solyc09g056450.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch09: 49221860-49222359 Solanum lycopersicum
Solyc09g056450.2 1.0kb upstream 1.0kb upstream 3132 true SL2.50ch09: 49222360-49225491 Solanum lycopersicum
Solyc09g056450.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch09: 49224492-49225491 Solanum lycopersicum
Solyc09g056450.2 1.0kb downstream 1.0kb downstream 3132 true SL2.50ch09: 49221360-49224491 Solanum lycopersicum
Solyc09g056450.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch09: 49221360-49222359 Solanum lycopersicum
Solyc09g056450.2 2.0kb upstream 2.0kb upstream 4132 true SL2.50ch09: 49222360-49226491 Solanum lycopersicum
Solyc09g056450.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch09: 49224492-49226491 Solanum lycopersicum
Solyc09g056450.2 2.0kb downstream 2.0kb downstream 4132 true SL2.50ch09: 49220360-49224491 Solanum lycopersicum
Solyc09g056450.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch09: 49220360-49222359 Solanum lycopersicum
Solyc09g056450.2 5.0kb upstream 5.0kb upstream 7132 true SL2.50ch09: 49222360-49229491 Solanum lycopersicum
Solyc09g056450.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch09: 49224492-49229491 Solanum lycopersicum
Solyc09g056450.2 5.0kb downstream 5.0kb downstream 7132 true SL2.50ch09: 49217360-49224491 Solanum lycopersicum
Solyc09g056450.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch09: 49217360-49222359 Solanum lycopersicum
Solyc09g056450.2 10.0kb upstream 10.0kb upstream 12132 true SL2.50ch09: 49222360-49234491 Solanum lycopersicum
Solyc09g056450.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch09: 49224492-49234491 Solanum lycopersicum
Solyc09g056450.2 10.0kb downstream 10.0kb downstream 12132 true SL2.50ch09: 49212360-49224491 Solanum lycopersicum
Solyc09g056450.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch09: 49212360-49222359 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029179 5273 Angiosperm View MSA
121475184 5263 Asterids View MSA
123745896 5271 Pentapetalae View MSA
122785914 5272 Eudicot View MSA
121350406 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain