Gene : Solyc09g055230.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR11638:SF68 - DOUBLE CLP-N MOTIF-CONTAINING P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE DOMAIN-CONTAINING PROTEIN-RELATED Description:  ATP-dependent Clp protease ATP-binding subunit (AHRD V1 *--- A2RIW9_LACLM); contains Interpro domain(s) IPR001270 Chaperonin clpA/B
Genomic Order:  1080 Name:  ? Solyc09g055230.2
Secondary Identifier:  ? PAC:36131374
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc09g055230.2 0.5kb upstream 0.5kb upstream 12177 true SL2.50ch09: 37751389-37763565 Solanum lycopersicum
Solyc09g055230.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch09: 37751389-37751888 Solanum lycopersicum
Solyc09g055230.2 0.5kb downstream 0.5kb downstream 12177 true SL2.50ch09: 37751889-37764065 Solanum lycopersicum
Solyc09g055230.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch09: 37763566-37764065 Solanum lycopersicum
Solyc09g055230.2 1.0kb upstream 1.0kb upstream 12677 true SL2.50ch09: 37750889-37763565 Solanum lycopersicum
Solyc09g055230.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch09: 37750889-37751888 Solanum lycopersicum
Solyc09g055230.2 1.0kb downstream 1.0kb downstream 12677 true SL2.50ch09: 37751889-37764565 Solanum lycopersicum
Solyc09g055230.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch09: 37763566-37764565 Solanum lycopersicum
Solyc09g055230.2 2.0kb upstream 2.0kb upstream 13677 true SL2.50ch09: 37749889-37763565 Solanum lycopersicum
Solyc09g055230.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch09: 37749889-37751888 Solanum lycopersicum
Solyc09g055230.2 2.0kb downstream 2.0kb downstream 13677 true SL2.50ch09: 37751889-37765565 Solanum lycopersicum
Solyc09g055230.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch09: 37763566-37765565 Solanum lycopersicum
Solyc09g055230.2 5.0kb upstream 5.0kb upstream 16677 true SL2.50ch09: 37746889-37763565 Solanum lycopersicum
Solyc09g055230.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch09: 37746889-37751888 Solanum lycopersicum
Solyc09g055230.2 5.0kb downstream 5.0kb downstream 16677 true SL2.50ch09: 37751889-37768565 Solanum lycopersicum
Solyc09g055230.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch09: 37763566-37768565 Solanum lycopersicum
Solyc09g055230.2 10.0kb upstream 10.0kb upstream 21677 true SL2.50ch09: 37741889-37763565 Solanum lycopersicum
Solyc09g055230.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch09: 37741889-37751888 Solanum lycopersicum
Solyc09g055230.2 10.0kb downstream 10.0kb downstream 21677 true SL2.50ch09: 37751889-37773565 Solanum lycopersicum
Solyc09g055230.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch09: 37763566-37773565 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468100 5263 Asterids View MSA
123749944 5271 Pentapetalae View MSA
122787695 5272 Eudicot View MSA
122043701 5273 Angiosperm View MSA
121351273 5274 Embryophyte View MSA
123382090 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain