Gene : Solyc09g061250.2 S. lycopersicum ITAG2.4
Defline:  (1 of 18) PF00651//PF03000 - BTB/POZ domain (BTB) // NPH3 family (NPH3) Description:  Phototropic-responsive NPH3 family protein (AHRD V1 **-- D7MMM6_ARALY); contains Interpro domain(s) IPR004249 NPH3
Genomic Order:  1367 Name:  ? Solyc09g061250.2
Secondary Identifier:  ? PAC:36132876
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc09g061250.2 0.5kb upstream 0.5kb upstream 3053 true SL2.50ch09: 58386325-58389377 Solanum lycopersicum
Solyc09g061250.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch09: 58388878-58389377 Solanum lycopersicum
Solyc09g061250.2 0.5kb downstream 0.5kb downstream 3053 true SL2.50ch09: 58385825-58388877 Solanum lycopersicum
Solyc09g061250.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch09: 58385825-58386324 Solanum lycopersicum
Solyc09g061250.2 1.0kb upstream 1.0kb upstream 3553 true SL2.50ch09: 58386325-58389877 Solanum lycopersicum
Solyc09g061250.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch09: 58388878-58389877 Solanum lycopersicum
Solyc09g061250.2 1.0kb downstream 1.0kb downstream 3553 true SL2.50ch09: 58385325-58388877 Solanum lycopersicum
Solyc09g061250.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch09: 58385325-58386324 Solanum lycopersicum
Solyc09g061250.2 2.0kb upstream 2.0kb upstream 4553 true SL2.50ch09: 58386325-58390877 Solanum lycopersicum
Solyc09g061250.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch09: 58388878-58390877 Solanum lycopersicum
Solyc09g061250.2 2.0kb downstream 2.0kb downstream 4553 true SL2.50ch09: 58384325-58388877 Solanum lycopersicum
Solyc09g061250.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch09: 58384325-58386324 Solanum lycopersicum
Solyc09g061250.2 5.0kb upstream 5.0kb upstream 7553 true SL2.50ch09: 58386325-58393877 Solanum lycopersicum
Solyc09g061250.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch09: 58388878-58393877 Solanum lycopersicum
Solyc09g061250.2 5.0kb downstream 5.0kb downstream 7553 true SL2.50ch09: 58381325-58388877 Solanum lycopersicum
Solyc09g061250.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch09: 58381325-58386324 Solanum lycopersicum
Solyc09g061250.2 10.0kb upstream 10.0kb upstream 12553 true SL2.50ch09: 58386325-58398877 Solanum lycopersicum
Solyc09g061250.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch09: 58388878-58398877 Solanum lycopersicum
Solyc09g061250.2 10.0kb downstream 10.0kb downstream 12553 true SL2.50ch09: 58376325-58388877 Solanum lycopersicum
Solyc09g061250.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch09: 58376325-58386324 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479189 5263 Asterids View MSA
123743822 5271 Pentapetalae View MSA
122789563 5272 Eudicot View MSA
122044004 5273 Angiosperm View MSA
121350656 5274 Embryophyte View MSA
123381839 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain