Gene : Solyc09g011270.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR13871:SF30 - CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN-RELATED Description:  CHP-rich zinc finger protein-like (AHRD V1 **-- Q8H5Y9_ORYSJ); contains Interpro domain(s) IPR011424 C1-like
Genomic Order:  521 Name:  ? Solyc09g011270.2
Secondary Identifier:  ? PAC:36133430
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-7039 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc09g011270.2 0.5kb upstream 0.5kb upstream 2624 true SL2.50ch09: 4602503-4605126 Solanum lycopersicum
Solyc09g011270.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch09: 4602503-4603002 Solanum lycopersicum
Solyc09g011270.2 0.5kb downstream 0.5kb downstream 2624 true SL2.50ch09: 4603003-4605626 Solanum lycopersicum
Solyc09g011270.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch09: 4605127-4605626 Solanum lycopersicum
Solyc09g011270.2 1.0kb upstream 1.0kb upstream 3124 true SL2.50ch09: 4602003-4605126 Solanum lycopersicum
Solyc09g011270.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch09: 4602003-4603002 Solanum lycopersicum
Solyc09g011270.2 1.0kb downstream 1.0kb downstream 3124 true SL2.50ch09: 4603003-4606126 Solanum lycopersicum
Solyc09g011270.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch09: 4605127-4606126 Solanum lycopersicum
Solyc09g011270.2 2.0kb upstream 2.0kb upstream 4124 true SL2.50ch09: 4601003-4605126 Solanum lycopersicum
Solyc09g011270.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch09: 4601003-4603002 Solanum lycopersicum
Solyc09g011270.2 2.0kb downstream 2.0kb downstream 4124 true SL2.50ch09: 4603003-4607126 Solanum lycopersicum
Solyc09g011270.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch09: 4605127-4607126 Solanum lycopersicum
Solyc09g011270.2 5.0kb upstream 5.0kb upstream 7124 true SL2.50ch09: 4598003-4605126 Solanum lycopersicum
Solyc09g011270.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch09: 4598003-4603002 Solanum lycopersicum
Solyc09g011270.2 5.0kb downstream 5.0kb downstream 7124 true SL2.50ch09: 4603003-4610126 Solanum lycopersicum
Solyc09g011270.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch09: 4605127-4610126 Solanum lycopersicum
Solyc09g011270.2 10.0kb upstream 10.0kb upstream 12124 true SL2.50ch09: 4593003-4605126 Solanum lycopersicum
Solyc09g011270.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch09: 4593003-4603002 Solanum lycopersicum
Solyc09g011270.2 10.0kb downstream 10.0kb downstream 12124 true SL2.50ch09: 4603003-4615126 Solanum lycopersicum
Solyc09g011270.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch09: 4605127-4615126 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479767 5263 Asterids View MSA
123750493 5271 Pentapetalae View MSA
122796546 5272 Eudicot View MSA
122051127 5273 Angiosperm View MSA
121351229 5274 Embryophyte View MSA
123382066 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain