Gene : Solyc09g030390.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K13171 - serine/arginine repetitive matrix protein 1 (SRRM1, SRM160) Description:  Serine/arginine repetitive matrix 1 (Fragment) (AHRD V1 *--- Q28CC2_XENTR); contains Interpro domain(s) IPR002483 Splicing factor PWI
Genomic Order:  1037 Name:  ? Solyc09g030390.2
Secondary Identifier:  ? PAC:36131796
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc09g030390.2 0.5kb upstream 0.5kb upstream 7079 true SL2.50ch09: 31890316-31897394 Solanum lycopersicum
Solyc09g030390.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch09: 31896895-31897394 Solanum lycopersicum
Solyc09g030390.2 0.5kb downstream 0.5kb downstream 7079 true SL2.50ch09: 31889816-31896894 Solanum lycopersicum
Solyc09g030390.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch09: 31889816-31890315 Solanum lycopersicum
Solyc09g030390.2 1.0kb upstream 1.0kb upstream 7579 true SL2.50ch09: 31890316-31897894 Solanum lycopersicum
Solyc09g030390.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch09: 31896895-31897894 Solanum lycopersicum
Solyc09g030390.2 1.0kb downstream 1.0kb downstream 7579 true SL2.50ch09: 31889316-31896894 Solanum lycopersicum
Solyc09g030390.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch09: 31889316-31890315 Solanum lycopersicum
Solyc09g030390.2 2.0kb upstream 2.0kb upstream 8579 true SL2.50ch09: 31890316-31898894 Solanum lycopersicum
Solyc09g030390.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch09: 31896895-31898894 Solanum lycopersicum
Solyc09g030390.2 2.0kb downstream 2.0kb downstream 8579 true SL2.50ch09: 31888316-31896894 Solanum lycopersicum
Solyc09g030390.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch09: 31888316-31890315 Solanum lycopersicum
Solyc09g030390.2 5.0kb upstream 5.0kb upstream 11579 true SL2.50ch09: 31890316-31901894 Solanum lycopersicum
Solyc09g030390.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch09: 31896895-31901894 Solanum lycopersicum
Solyc09g030390.2 5.0kb downstream 5.0kb downstream 11579 true SL2.50ch09: 31885316-31896894 Solanum lycopersicum
Solyc09g030390.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch09: 31885316-31890315 Solanum lycopersicum
Solyc09g030390.2 10.0kb upstream 10.0kb upstream 16579 true SL2.50ch09: 31890316-31906894 Solanum lycopersicum
Solyc09g030390.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch09: 31896895-31906894 Solanum lycopersicum
Solyc09g030390.2 10.0kb downstream 10.0kb downstream 16579 true SL2.50ch09: 31880316-31896894 Solanum lycopersicum
Solyc09g030390.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch09: 31880316-31890315 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476555 5263 Asterids View MSA
123744487 5271 Pentapetalae View MSA
122788944 5272 Eudicot View MSA
122044269 5273 Angiosperm View MSA
121345775 5274 Embryophyte View MSA
123427375 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain