Gene : Solyc09g015330.1 S. lycopersicum ITAG2.4
Defline:  (1 of 7) KOG3301 - Ribosomal protein S4 Description:  30S ribosomal protein S4, chloroplastic (Fragment) (AHRD V1 ***- RR4_SISST); contains Interpro domain(s) IPR002942 RNA-binding S4
Genomic Order:  723 Name:  ? Solyc09g015330.1
Secondary Identifier:  ? PAC:36132838
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc09g015330.1 0.5kb upstream 0.5kb upstream 1031 true SL2.50ch09: 8547347-8548377 Solanum lycopersicum
Solyc09g015330.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch09: 8547347-8547846 Solanum lycopersicum
Solyc09g015330.1 0.5kb downstream 0.5kb downstream 1031 true SL2.50ch09: 8547847-8548877 Solanum lycopersicum
Solyc09g015330.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch09: 8548378-8548877 Solanum lycopersicum
Solyc09g015330.1 1.0kb upstream 1.0kb upstream 1531 true SL2.50ch09: 8546847-8548377 Solanum lycopersicum
Solyc09g015330.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch09: 8546847-8547846 Solanum lycopersicum
Solyc09g015330.1 1.0kb downstream 1.0kb downstream 1531 true SL2.50ch09: 8547847-8549377 Solanum lycopersicum
Solyc09g015330.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch09: 8548378-8549377 Solanum lycopersicum
Solyc09g015330.1 2.0kb upstream 2.0kb upstream 2531 true SL2.50ch09: 8545847-8548377 Solanum lycopersicum
Solyc09g015330.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch09: 8545847-8547846 Solanum lycopersicum
Solyc09g015330.1 2.0kb downstream 2.0kb downstream 2531 true SL2.50ch09: 8547847-8550377 Solanum lycopersicum
Solyc09g015330.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch09: 8548378-8550377 Solanum lycopersicum
Solyc09g015330.1 5.0kb upstream 5.0kb upstream 5531 true SL2.50ch09: 8542847-8548377 Solanum lycopersicum
Solyc09g015330.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch09: 8542847-8547846 Solanum lycopersicum
Solyc09g015330.1 5.0kb downstream 5.0kb downstream 5531 true SL2.50ch09: 8547847-8553377 Solanum lycopersicum
Solyc09g015330.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch09: 8548378-8553377 Solanum lycopersicum
Solyc09g015330.1 10.0kb upstream 10.0kb upstream 10531 true SL2.50ch09: 8537847-8548377 Solanum lycopersicum
Solyc09g015330.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch09: 8537847-8547846 Solanum lycopersicum
Solyc09g015330.1 10.0kb downstream 10.0kb downstream 10531 true SL2.50ch09: 8547847-8558377 Solanum lycopersicum
Solyc09g015330.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch09: 8548378-8558377 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028910 5273 Angiosperm View MSA
121370231 5263 Asterids Singleton cluster - no MSA
123750002 5271 Pentapetalae View MSA
122790562 5272 Eudicot View MSA
121298338 5274 Embryophyte View MSA
123336315 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain