Gene : Solyc09g098390.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K13155 - U11/U12 small nuclear ribonucleoprotein 35 kDa protein (SNRNP35) Description:  U1 small nuclear ribonucleoprotein protein (AHRD V1 *--- D3B3S8_POLPA); contains Interpro domain(s) IPR012677 Nucleotide-binding, alpha-beta plait
Genomic Order:  2477 Name:  ? Solyc09g098390.2
Secondary Identifier:  ? PAC:36133506
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc09g098390.2 0.5kb upstream 0.5kb upstream 5529 true SL2.50ch09: 72218511-72224039 Solanum lycopersicum
Solyc09g098390.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch09: 72223540-72224039 Solanum lycopersicum
Solyc09g098390.2 0.5kb downstream 0.5kb downstream 5529 true SL2.50ch09: 72218011-72223539 Solanum lycopersicum
Solyc09g098390.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch09: 72218011-72218510 Solanum lycopersicum
Solyc09g098390.2 1.0kb upstream 1.0kb upstream 6029 true SL2.50ch09: 72218511-72224539 Solanum lycopersicum
Solyc09g098390.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch09: 72223540-72224539 Solanum lycopersicum
Solyc09g098390.2 1.0kb downstream 1.0kb downstream 6029 true SL2.50ch09: 72217511-72223539 Solanum lycopersicum
Solyc09g098390.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch09: 72217511-72218510 Solanum lycopersicum
Solyc09g098390.2 2.0kb upstream 2.0kb upstream 7029 true SL2.50ch09: 72218511-72225539 Solanum lycopersicum
Solyc09g098390.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch09: 72223540-72225539 Solanum lycopersicum
Solyc09g098390.2 2.0kb downstream 2.0kb downstream 7029 true SL2.50ch09: 72216511-72223539 Solanum lycopersicum
Solyc09g098390.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch09: 72216511-72218510 Solanum lycopersicum
Solyc09g098390.2 5.0kb upstream 5.0kb upstream 10029 true SL2.50ch09: 72218511-72228539 Solanum lycopersicum
Solyc09g098390.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch09: 72223540-72228539 Solanum lycopersicum
Solyc09g098390.2 5.0kb downstream 5.0kb downstream 10029 true SL2.50ch09: 72213511-72223539 Solanum lycopersicum
Solyc09g098390.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch09: 72213511-72218510 Solanum lycopersicum
Solyc09g098390.2 10.0kb upstream 10.0kb upstream 15029 true SL2.50ch09: 72218511-72233539 Solanum lycopersicum
Solyc09g098390.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch09: 72223540-72233539 Solanum lycopersicum
Solyc09g098390.2 10.0kb downstream 10.0kb downstream 15029 true SL2.50ch09: 72208511-72223539 Solanum lycopersicum
Solyc09g098390.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch09: 72208511-72218510 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466945 5263 Asterids View MSA
123739426 5271 Pentapetalae View MSA
122792874 5272 Eudicot View MSA
122049449 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121351469 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain