Gene : Solyc09g092450.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) 6.2.1.20 - Long-chain-fatty-acid--[acyl-carrier-protein] ligase / Acyl-[acyl-carrier-protein] synthetase Description:  Long-chain-fatty-acid CoA ligase (AHRD V1 ***- Q9LK39_ARATH); contains Interpro domain(s) IPR000873 AMP-dependent synthetase and ligase
Genomic Order:  2387 Name:  ? Solyc09g092450.2
Secondary Identifier:  ? PAC:36133255
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-6622 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc09g092450.2 0.5kb upstream 0.5kb upstream 11468 true SL2.50ch09: 71534857-71546324 Solanum lycopersicum
Solyc09g092450.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch09: 71545825-71546324 Solanum lycopersicum
Solyc09g092450.2 0.5kb downstream 0.5kb downstream 11468 true SL2.50ch09: 71534357-71545824 Solanum lycopersicum
Solyc09g092450.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch09: 71534357-71534856 Solanum lycopersicum
Solyc09g092450.2 1.0kb upstream 1.0kb upstream 11968 true SL2.50ch09: 71534857-71546824 Solanum lycopersicum
Solyc09g092450.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch09: 71545825-71546824 Solanum lycopersicum
Solyc09g092450.2 1.0kb downstream 1.0kb downstream 11968 true SL2.50ch09: 71533857-71545824 Solanum lycopersicum
Solyc09g092450.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch09: 71533857-71534856 Solanum lycopersicum
Solyc09g092450.2 2.0kb upstream 2.0kb upstream 12968 true SL2.50ch09: 71534857-71547824 Solanum lycopersicum
Solyc09g092450.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch09: 71545825-71547824 Solanum lycopersicum
Solyc09g092450.2 2.0kb downstream 2.0kb downstream 12968 true SL2.50ch09: 71532857-71545824 Solanum lycopersicum
Solyc09g092450.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch09: 71532857-71534856 Solanum lycopersicum
Solyc09g092450.2 5.0kb upstream 5.0kb upstream 15968 true SL2.50ch09: 71534857-71550824 Solanum lycopersicum
Solyc09g092450.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch09: 71545825-71550824 Solanum lycopersicum
Solyc09g092450.2 5.0kb downstream 5.0kb downstream 15968 true SL2.50ch09: 71529857-71545824 Solanum lycopersicum
Solyc09g092450.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch09: 71529857-71534856 Solanum lycopersicum
Solyc09g092450.2 10.0kb upstream 10.0kb upstream 20968 true SL2.50ch09: 71534857-71555824 Solanum lycopersicum
Solyc09g092450.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch09: 71545825-71555824 Solanum lycopersicum
Solyc09g092450.2 10.0kb downstream 10.0kb downstream 20968 true SL2.50ch09: 71524857-71545824 Solanum lycopersicum
Solyc09g092450.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch09: 71524857-71534856 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474778 5263 Asterids View MSA
123740730 5271 Pentapetalae View MSA
122788844 5272 Eudicot View MSA
122041588 5273 Angiosperm View MSA
121344484 5274 Embryophyte View MSA
123427454 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain