Gene : Solyc05g009220.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) 6.1.1.18 - Glutamine--tRNA ligase / Glutaminyl-tRNA synthetase Description:  Glutaminyl-tRNA synthetase (AHRD V1 ***- B6UC34_MAIZE); contains Interpro domain(s) IPR004514 Glutaminyl-tRNA synthetase, class Ic
Genomic Order:  421 Name:  ? Solyc05g009220.2
Secondary Identifier:  ? PAC:36144623
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum TRNA-CHARGING-PWY Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc05g009220.2 0.5kb upstream 0.5kb upstream 9839 true SL2.50ch05: 3359796-3369634 Solanum lycopersicum
Solyc05g009220.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch05: 3359796-3360295 Solanum lycopersicum
Solyc05g009220.2 0.5kb downstream 0.5kb downstream 9839 true SL2.50ch05: 3360296-3370134 Solanum lycopersicum
Solyc05g009220.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch05: 3369635-3370134 Solanum lycopersicum
Solyc05g009220.2 1.0kb upstream 1.0kb upstream 10339 true SL2.50ch05: 3359296-3369634 Solanum lycopersicum
Solyc05g009220.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch05: 3359296-3360295 Solanum lycopersicum
Solyc05g009220.2 1.0kb downstream 1.0kb downstream 10339 true SL2.50ch05: 3360296-3370634 Solanum lycopersicum
Solyc05g009220.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch05: 3369635-3370634 Solanum lycopersicum
Solyc05g009220.2 2.0kb upstream 2.0kb upstream 11339 true SL2.50ch05: 3358296-3369634 Solanum lycopersicum
Solyc05g009220.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch05: 3358296-3360295 Solanum lycopersicum
Solyc05g009220.2 2.0kb downstream 2.0kb downstream 11339 true SL2.50ch05: 3360296-3371634 Solanum lycopersicum
Solyc05g009220.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch05: 3369635-3371634 Solanum lycopersicum
Solyc05g009220.2 5.0kb upstream 5.0kb upstream 14339 true SL2.50ch05: 3355296-3369634 Solanum lycopersicum
Solyc05g009220.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch05: 3355296-3360295 Solanum lycopersicum
Solyc05g009220.2 5.0kb downstream 5.0kb downstream 14339 true SL2.50ch05: 3360296-3374634 Solanum lycopersicum
Solyc05g009220.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch05: 3369635-3374634 Solanum lycopersicum
Solyc05g009220.2 10.0kb upstream 10.0kb upstream 19339 true SL2.50ch05: 3350296-3369634 Solanum lycopersicum
Solyc05g009220.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch05: 3350296-3360295 Solanum lycopersicum
Solyc05g009220.2 10.0kb downstream 10.0kb downstream 19339 true SL2.50ch05: 3360296-3379634 Solanum lycopersicum
Solyc05g009220.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch05: 3369635-3379634 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472989 5263 Asterids View MSA
123744952 5271 Pentapetalae View MSA
122789610 5272 Eudicot View MSA
122046880 5273 Angiosperm View MSA
121346731 5274 Embryophyte View MSA
123424701 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain