Gene : Solyc05g008400.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR22504 - REPRESSOR OF RNA POLYMERASE III TRANSCRIPTION MAF1 Description:  Repressor of RNA polymerase III transcription MAF1 (AHRD V1 **** B6TPC2_MAIZE); contains Interpro domain(s) IPR017152 RNA polymerase III transcriptional repressor, MAF1
Genomic Order:  339 Name:  ? Solyc05g008400.2
Secondary Identifier:  ? PAC:36144171
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc05g008400.2 0.5kb upstream 0.5kb upstream 4199 true SL2.50ch05: 2769041-2773239 Solanum lycopersicum
Solyc05g008400.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch05: 2769041-2769540 Solanum lycopersicum
Solyc05g008400.2 0.5kb downstream 0.5kb downstream 4199 true SL2.50ch05: 2769541-2773739 Solanum lycopersicum
Solyc05g008400.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch05: 2773240-2773739 Solanum lycopersicum
Solyc05g008400.2 1.0kb upstream 1.0kb upstream 4699 true SL2.50ch05: 2768541-2773239 Solanum lycopersicum
Solyc05g008400.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch05: 2768541-2769540 Solanum lycopersicum
Solyc05g008400.2 1.0kb downstream 1.0kb downstream 4699 true SL2.50ch05: 2769541-2774239 Solanum lycopersicum
Solyc05g008400.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch05: 2773240-2774239 Solanum lycopersicum
Solyc05g008400.2 2.0kb upstream 2.0kb upstream 5699 true SL2.50ch05: 2767541-2773239 Solanum lycopersicum
Solyc05g008400.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch05: 2767541-2769540 Solanum lycopersicum
Solyc05g008400.2 2.0kb downstream 2.0kb downstream 5699 true SL2.50ch05: 2769541-2775239 Solanum lycopersicum
Solyc05g008400.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch05: 2773240-2775239 Solanum lycopersicum
Solyc05g008400.2 5.0kb upstream 5.0kb upstream 8699 true SL2.50ch05: 2764541-2773239 Solanum lycopersicum
Solyc05g008400.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch05: 2764541-2769540 Solanum lycopersicum
Solyc05g008400.2 5.0kb downstream 5.0kb downstream 8699 true SL2.50ch05: 2769541-2778239 Solanum lycopersicum
Solyc05g008400.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch05: 2773240-2778239 Solanum lycopersicum
Solyc05g008400.2 10.0kb upstream 10.0kb upstream 13699 true SL2.50ch05: 2759541-2773239 Solanum lycopersicum
Solyc05g008400.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch05: 2759541-2769540 Solanum lycopersicum
Solyc05g008400.2 10.0kb downstream 10.0kb downstream 13699 true SL2.50ch05: 2769541-2783239 Solanum lycopersicum
Solyc05g008400.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch05: 2773240-2783239 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469895 5263 Asterids View MSA
123748418 5271 Pentapetalae View MSA
122792340 5272 Eudicot View MSA
122047316 5273 Angiosperm View MSA
121345866 5274 Embryophyte View MSA
123424535 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain