Gene : Solyc05g007500.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR10794:SF53 - CAAX AMINO TERMINAL PROTEASE FAMILY PROTEIN Description:  CAAX amino terminal protease family protein (AHRD V1 ***- B6T405_MAIZE); contains Interpro domain(s) IPR003675 Abortive infection protein
Genomic Order:  249 Name:  ? Solyc05g007500.2
Secondary Identifier:  ? PAC:36144976
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc05g007500.2 0.5kb upstream 0.5kb upstream 4349 true SL2.50ch05: 2057719-2062067 Solanum lycopersicum
Solyc05g007500.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch05: 2057719-2058218 Solanum lycopersicum
Solyc05g007500.2 0.5kb downstream 0.5kb downstream 4349 true SL2.50ch05: 2058219-2062567 Solanum lycopersicum
Solyc05g007500.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch05: 2062068-2062567 Solanum lycopersicum
Solyc05g007500.2 1.0kb upstream 1.0kb upstream 4849 true SL2.50ch05: 2057219-2062067 Solanum lycopersicum
Solyc05g007500.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch05: 2057219-2058218 Solanum lycopersicum
Solyc05g007500.2 1.0kb downstream 1.0kb downstream 4849 true SL2.50ch05: 2058219-2063067 Solanum lycopersicum
Solyc05g007500.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch05: 2062068-2063067 Solanum lycopersicum
Solyc05g007500.2 2.0kb upstream 2.0kb upstream 5849 true SL2.50ch05: 2056219-2062067 Solanum lycopersicum
Solyc05g007500.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch05: 2056219-2058218 Solanum lycopersicum
Solyc05g007500.2 2.0kb downstream 2.0kb downstream 5849 true SL2.50ch05: 2058219-2064067 Solanum lycopersicum
Solyc05g007500.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch05: 2062068-2064067 Solanum lycopersicum
Solyc05g007500.2 5.0kb upstream 5.0kb upstream 8849 true SL2.50ch05: 2053219-2062067 Solanum lycopersicum
Solyc05g007500.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch05: 2053219-2058218 Solanum lycopersicum
Solyc05g007500.2 5.0kb downstream 5.0kb downstream 8849 true SL2.50ch05: 2058219-2067067 Solanum lycopersicum
Solyc05g007500.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch05: 2062068-2067067 Solanum lycopersicum
Solyc05g007500.2 10.0kb upstream 10.0kb upstream 13849 true SL2.50ch05: 2048219-2062067 Solanum lycopersicum
Solyc05g007500.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch05: 2048219-2058218 Solanum lycopersicum
Solyc05g007500.2 10.0kb downstream 10.0kb downstream 13849 true SL2.50ch05: 2058219-2072067 Solanum lycopersicum
Solyc05g007500.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch05: 2062068-2072067 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474192 5263 Asterids View MSA
123740423 5271 Pentapetalae View MSA
122790684 5272 Eudicot View MSA
122042712 5273 Angiosperm View MSA
121349023 5274 Embryophyte View MSA
123428279 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain