Gene : Solyc05g007890.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR31499:SF11 - HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN Description:  Myb family transcription factor-like (AHRD V1 *--* Q6H510_ORYSJ); contains Interpro domain(s) IPR006447 Myb-like DNA-binding region, SHAQKYF class
Genomic Order:  288 Name:  ? Solyc05g007890.2
Secondary Identifier:  ? PAC:36145945
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc05g007890.2 0.5kb upstream 0.5kb upstream 2515 true SL2.50ch05: 2339932-2342446 Solanum lycopersicum
Solyc05g007890.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch05: 2339932-2340431 Solanum lycopersicum
Solyc05g007890.2 0.5kb downstream 0.5kb downstream 2515 true SL2.50ch05: 2340432-2342946 Solanum lycopersicum
Solyc05g007890.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch05: 2342447-2342946 Solanum lycopersicum
Solyc05g007890.2 1.0kb upstream 1.0kb upstream 3015 true SL2.50ch05: 2339432-2342446 Solanum lycopersicum
Solyc05g007890.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch05: 2339432-2340431 Solanum lycopersicum
Solyc05g007890.2 1.0kb downstream 1.0kb downstream 3015 true SL2.50ch05: 2340432-2343446 Solanum lycopersicum
Solyc05g007890.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch05: 2342447-2343446 Solanum lycopersicum
Solyc05g007890.2 2.0kb upstream 2.0kb upstream 4015 true SL2.50ch05: 2338432-2342446 Solanum lycopersicum
Solyc05g007890.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch05: 2338432-2340431 Solanum lycopersicum
Solyc05g007890.2 2.0kb downstream 2.0kb downstream 4015 true SL2.50ch05: 2340432-2344446 Solanum lycopersicum
Solyc05g007890.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch05: 2342447-2344446 Solanum lycopersicum
Solyc05g007890.2 5.0kb upstream 5.0kb upstream 7015 true SL2.50ch05: 2335432-2342446 Solanum lycopersicum
Solyc05g007890.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch05: 2335432-2340431 Solanum lycopersicum
Solyc05g007890.2 5.0kb downstream 5.0kb downstream 7015 true SL2.50ch05: 2340432-2347446 Solanum lycopersicum
Solyc05g007890.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch05: 2342447-2347446 Solanum lycopersicum
Solyc05g007890.2 10.0kb upstream 10.0kb upstream 12015 true SL2.50ch05: 2330432-2342446 Solanum lycopersicum
Solyc05g007890.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch05: 2330432-2340431 Solanum lycopersicum
Solyc05g007890.2 10.0kb downstream 10.0kb downstream 12015 true SL2.50ch05: 2340432-2352446 Solanum lycopersicum
Solyc05g007890.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch05: 2342447-2352446 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791710 5273 Angiosperm View MSA
121467960 5263 Asterids View MSA
123742453 5271 Pentapetalae View MSA
122786457 5272 Eudicot View MSA
123428935 5275 Viridiplantae View MSA
121350891 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain