Gene : Solyc05g007060.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PF07063 - Domain of unknown function (DUF1338) (DUF1338) Description:  Bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (AHRD V1 **-- A8T8Q5_9VIBR)
Genomic Order:  206 Name:  ? Solyc05g007060.2
Secondary Identifier:  ? PAC:36146257
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc05g007060.2 0.5kb upstream 0.5kb upstream 5159 true SL2.50ch05: 1644471-1649629 Solanum lycopersicum
Solyc05g007060.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch05: 1649130-1649629 Solanum lycopersicum
Solyc05g007060.2 0.5kb downstream 0.5kb downstream 5159 true SL2.50ch05: 1643971-1649129 Solanum lycopersicum
Solyc05g007060.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch05: 1643971-1644470 Solanum lycopersicum
Solyc05g007060.2 1.0kb upstream 1.0kb upstream 5659 true SL2.50ch05: 1644471-1650129 Solanum lycopersicum
Solyc05g007060.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch05: 1649130-1650129 Solanum lycopersicum
Solyc05g007060.2 1.0kb downstream 1.0kb downstream 5659 true SL2.50ch05: 1643471-1649129 Solanum lycopersicum
Solyc05g007060.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch05: 1643471-1644470 Solanum lycopersicum
Solyc05g007060.2 2.0kb upstream 2.0kb upstream 6659 true SL2.50ch05: 1644471-1651129 Solanum lycopersicum
Solyc05g007060.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch05: 1649130-1651129 Solanum lycopersicum
Solyc05g007060.2 2.0kb downstream 2.0kb downstream 6659 true SL2.50ch05: 1642471-1649129 Solanum lycopersicum
Solyc05g007060.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch05: 1642471-1644470 Solanum lycopersicum
Solyc05g007060.2 5.0kb upstream 5.0kb upstream 9659 true SL2.50ch05: 1644471-1654129 Solanum lycopersicum
Solyc05g007060.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch05: 1649130-1654129 Solanum lycopersicum
Solyc05g007060.2 5.0kb downstream 5.0kb downstream 9659 true SL2.50ch05: 1639471-1649129 Solanum lycopersicum
Solyc05g007060.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch05: 1639471-1644470 Solanum lycopersicum
Solyc05g007060.2 10.0kb upstream 10.0kb upstream 14659 true SL2.50ch05: 1644471-1659129 Solanum lycopersicum
Solyc05g007060.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch05: 1649130-1659129 Solanum lycopersicum
Solyc05g007060.2 10.0kb downstream 10.0kb downstream 14659 true SL2.50ch05: 1634471-1649129 Solanum lycopersicum
Solyc05g007060.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch05: 1634471-1644470 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474951 5263 Asterids View MSA
123746435 5271 Pentapetalae View MSA
122792736 5272 Eudicot View MSA
122043338 5273 Angiosperm View MSA
121346049 5274 Embryophyte View MSA
123425162 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain