Gene : Solyc05g009930.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) KOG1103 - Predicted coiled-coil protein Description:  Chloroplast unusual positioning 1A (AHRD V1 *--- B3IYT7_ADICA)
Genomic Order:  492 Name:  ? Solyc05g009930.2
Secondary Identifier:  ? PAC:36144634
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc05g009930.2 0.5kb upstream 0.5kb upstream 5846 true SL2.50ch05: 4150239-4156084 Solanum lycopersicum
Solyc05g009930.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch05: 4155585-4156084 Solanum lycopersicum
Solyc05g009930.2 0.5kb downstream 0.5kb downstream 5846 true SL2.50ch05: 4149739-4155584 Solanum lycopersicum
Solyc05g009930.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch05: 4149739-4150238 Solanum lycopersicum
Solyc05g009930.2 1.0kb upstream 1.0kb upstream 6346 true SL2.50ch05: 4150239-4156584 Solanum lycopersicum
Solyc05g009930.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch05: 4155585-4156584 Solanum lycopersicum
Solyc05g009930.2 1.0kb downstream 1.0kb downstream 6346 true SL2.50ch05: 4149239-4155584 Solanum lycopersicum
Solyc05g009930.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch05: 4149239-4150238 Solanum lycopersicum
Solyc05g009930.2 2.0kb upstream 2.0kb upstream 7346 true SL2.50ch05: 4150239-4157584 Solanum lycopersicum
Solyc05g009930.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch05: 4155585-4157584 Solanum lycopersicum
Solyc05g009930.2 2.0kb downstream 2.0kb downstream 7346 true SL2.50ch05: 4148239-4155584 Solanum lycopersicum
Solyc05g009930.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch05: 4148239-4150238 Solanum lycopersicum
Solyc05g009930.2 5.0kb upstream 5.0kb upstream 10346 true SL2.50ch05: 4150239-4160584 Solanum lycopersicum
Solyc05g009930.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch05: 4155585-4160584 Solanum lycopersicum
Solyc05g009930.2 5.0kb downstream 5.0kb downstream 10346 true SL2.50ch05: 4145239-4155584 Solanum lycopersicum
Solyc05g009930.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch05: 4145239-4150238 Solanum lycopersicum
Solyc05g009930.2 10.0kb upstream 10.0kb upstream 15346 true SL2.50ch05: 4150239-4165584 Solanum lycopersicum
Solyc05g009930.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch05: 4155585-4165584 Solanum lycopersicum
Solyc05g009930.2 10.0kb downstream 10.0kb downstream 15346 true SL2.50ch05: 4140239-4155584 Solanum lycopersicum
Solyc05g009930.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch05: 4140239-4150238 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472620 5263 Asterids View MSA
123739628 5271 Pentapetalae View MSA
122790649 5272 Eudicot View MSA
122047771 5273 Angiosperm View MSA
121348939 5274 Embryophyte View MSA
123381088 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain