Gene : Solyc05g015390.2 S. lycopersicum ITAG2.4
Defline:  (1 of 3) PF05755 - Rubber elongation factor protein (REF) (REF) Description:  REF-like stress related protein 1 (AHRD V1 *--- Q6XNP4_HEVBR); contains Interpro domain(s) IPR008802 Rubber elongation factor
Genomic Order:  932 Name:  ? Solyc05g015390.2
Secondary Identifier:  ? PAC:36146266
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc05g015390.2 0.5kb upstream 0.5kb upstream 2167 true SL2.50ch05: 10447858-10450024 Solanum lycopersicum
Solyc05g015390.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch05: 10447858-10448357 Solanum lycopersicum
Solyc05g015390.2 0.5kb downstream 0.5kb downstream 2167 true SL2.50ch05: 10448358-10450524 Solanum lycopersicum
Solyc05g015390.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch05: 10450025-10450524 Solanum lycopersicum
Solyc05g015390.2 1.0kb upstream 1.0kb upstream 2667 true SL2.50ch05: 10447358-10450024 Solanum lycopersicum
Solyc05g015390.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch05: 10447358-10448357 Solanum lycopersicum
Solyc05g015390.2 1.0kb downstream 1.0kb downstream 2667 true SL2.50ch05: 10448358-10451024 Solanum lycopersicum
Solyc05g015390.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch05: 10450025-10451024 Solanum lycopersicum
Solyc05g015390.2 2.0kb upstream 2.0kb upstream 3667 true SL2.50ch05: 10446358-10450024 Solanum lycopersicum
Solyc05g015390.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch05: 10446358-10448357 Solanum lycopersicum
Solyc05g015390.2 2.0kb downstream 2.0kb downstream 3667 true SL2.50ch05: 10448358-10452024 Solanum lycopersicum
Solyc05g015390.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch05: 10450025-10452024 Solanum lycopersicum
Solyc05g015390.2 5.0kb upstream 5.0kb upstream 6667 true SL2.50ch05: 10443358-10450024 Solanum lycopersicum
Solyc05g015390.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch05: 10443358-10448357 Solanum lycopersicum
Solyc05g015390.2 5.0kb downstream 5.0kb downstream 6667 true SL2.50ch05: 10448358-10455024 Solanum lycopersicum
Solyc05g015390.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch05: 10450025-10455024 Solanum lycopersicum
Solyc05g015390.2 10.0kb upstream 10.0kb upstream 11667 true SL2.50ch05: 10438358-10450024 Solanum lycopersicum
Solyc05g015390.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch05: 10438358-10448357 Solanum lycopersicum
Solyc05g015390.2 10.0kb downstream 10.0kb downstream 11667 true SL2.50ch05: 10448358-10460024 Solanum lycopersicum
Solyc05g015390.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch05: 10450025-10460024 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121413882 5263 Asterids View MSA
123736547 5271 Pentapetalae View MSA
122769867 5272 Eudicot View MSA
122050006 5273 Angiosperm View MSA
121311681 5274 Embryophyte View MSA
123348946 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain