Gene : Solyc05g015860.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) 4.1.2.27 - Sphinganine-1-phosphate aldolase / Sphingosine-1-phosphate lyase Description:  Sphingosine-1-phosphate lyase (AHRD V1 **-* Q549V9_ARATH); contains Interpro domain(s) IPR002129 Pyridoxal phosphate-dependent decarboxylase
Genomic Order:  979 Name:  ? Solyc05g015860.2
Secondary Identifier:  ? PAC:36144525
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc05g015860.2 0.5kb upstream 0.5kb upstream 7080 true SL2.50ch05: 12526430-12533509 Solanum lycopersicum
Solyc05g015860.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch05: 12526430-12526929 Solanum lycopersicum
Solyc05g015860.2 0.5kb downstream 0.5kb downstream 7080 true SL2.50ch05: 12526930-12534009 Solanum lycopersicum
Solyc05g015860.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch05: 12533510-12534009 Solanum lycopersicum
Solyc05g015860.2 1.0kb upstream 1.0kb upstream 7580 true SL2.50ch05: 12525930-12533509 Solanum lycopersicum
Solyc05g015860.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch05: 12525930-12526929 Solanum lycopersicum
Solyc05g015860.2 1.0kb downstream 1.0kb downstream 7580 true SL2.50ch05: 12526930-12534509 Solanum lycopersicum
Solyc05g015860.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch05: 12533510-12534509 Solanum lycopersicum
Solyc05g015860.2 2.0kb upstream 2.0kb upstream 8580 true SL2.50ch05: 12524930-12533509 Solanum lycopersicum
Solyc05g015860.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch05: 12524930-12526929 Solanum lycopersicum
Solyc05g015860.2 2.0kb downstream 2.0kb downstream 8580 true SL2.50ch05: 12526930-12535509 Solanum lycopersicum
Solyc05g015860.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch05: 12533510-12535509 Solanum lycopersicum
Solyc05g015860.2 5.0kb upstream 5.0kb upstream 11580 true SL2.50ch05: 12521930-12533509 Solanum lycopersicum
Solyc05g015860.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch05: 12521930-12526929 Solanum lycopersicum
Solyc05g015860.2 5.0kb downstream 5.0kb downstream 11580 true SL2.50ch05: 12526930-12538509 Solanum lycopersicum
Solyc05g015860.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch05: 12533510-12538509 Solanum lycopersicum
Solyc05g015860.2 10.0kb upstream 10.0kb upstream 16580 true SL2.50ch05: 12516930-12533509 Solanum lycopersicum
Solyc05g015860.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch05: 12516930-12526929 Solanum lycopersicum
Solyc05g015860.2 10.0kb downstream 10.0kb downstream 16580 true SL2.50ch05: 12526930-12543509 Solanum lycopersicum
Solyc05g015860.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch05: 12533510-12543509 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474256 5263 Asterids View MSA
123742910 5271 Pentapetalae View MSA
122789301 5272 Eudicot View MSA
122050571 5273 Angiosperm View MSA
121350243 5274 Embryophyte View MSA
123427084 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain